Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   EL130_RS08570 Genome accession   NZ_LR134320
Coordinates   1706808..1707287 (-) Length   159 a.a.
NCBI ID   WP_002267187.1    Uniprot ID   -
Organism   Streptococcus mutans strain NCTC10832     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1701808..1712287
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL130_RS08555 (NCTC10832_01673) alsS 1702536..1704215 (-) 1680 WP_002267190.1 acetolactate synthase AlsS -
  EL130_RS08560 (NCTC10832_01674) - 1704348..1705580 (-) 1233 WP_002290977.1 tetratricopeptide repeat protein -
  EL130_RS08565 (NCTC10832_01675) - 1705570..1706739 (-) 1170 WP_002263090.1 AI-2E family transporter -
  EL130_RS08570 (NCTC10832_01676) mutX 1706808..1707287 (-) 480 WP_002267187.1 NUDIX hydrolase Machinery gene
  EL130_RS08580 (NCTC10832_01677) rfbB 1707580..1708626 (-) 1047 WP_126475535.1 dTDP-glucose 4,6-dehydratase -
  EL130_RS08585 (NCTC10832_01678) - 1709019..1709195 (-) 177 WP_002266207.1 hypothetical protein -
  EL130_RS08590 (NCTC10832_01679) - 1709258..1709854 (-) 597 WP_002264623.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  EL130_RS08595 (NCTC10832_01680) rfbA 1709856..1710725 (-) 870 WP_002263084.1 glucose-1-phosphate thymidylyltransferase RfbA -
  EL130_RS08600 (NCTC10832_01681) - 1711021..1711809 (-) 789 WP_002274121.1 Nif3-like dinuclear metal center hexameric protein -

Sequence

Protein


Download         Length: 159 a.a.        Molecular weight: 18916.58 Da        Isoelectric Point: 5.6576

>NTDB_id=1001612 EL130_RS08570 WP_002267187.1 1706808..1707287(-) (mutX) [Streptococcus mutans strain NCTC10832]
MTKLATICYIDNGRELLLMHRNKKPNDVHEGKWISVGGKLEKGESPDECARREIFEETHLIVKQMDFKGIITFPDFTPGH
DWYTYVFKVRDFEGRLISDKDSREGTLEWVPYNQVLTKPTWEGDYEIFKWILEDAPFFSAKFVYQEQKLVDKHVIFYEK

Nucleotide


Download         Length: 480 bp        

>NTDB_id=1001612 EL130_RS08570 WP_002267187.1 1706808..1707287(-) (mutX) [Streptococcus mutans strain NCTC10832]
ATGACAAAATTAGCAACAATTTGTTATATTGATAACGGGCGCGAGCTTTTATTGATGCATCGTAATAAAAAACCGAATGA
TGTTCATGAAGGCAAATGGATTAGTGTAGGTGGAAAATTGGAAAAAGGAGAGAGTCCTGATGAATGTGCCAGACGTGAAA
TTTTTGAGGAGACTCATTTAATTGTCAAACAAATGGATTTTAAAGGCATTATTACTTTTCCAGATTTCACACCGGGTCAC
GATTGGTATACTTATGTGTTTAAGGTAAGAGATTTTGAAGGTCGGTTGATTTCTGATAAAGACAGTCGTGAAGGAACGTT
GGAATGGGTACCTTATAATCAGGTTTTAACTAAGCCAACATGGGAAGGCGACTATGAAATTTTTAAATGGATCTTAGAAG
ATGCCCCTTTTTTCTCTGCCAAATTTGTTTATCAAGAGCAAAAGCTAGTTGATAAACATGTGATTTTTTATGAAAAATAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(4-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

69.62

99.371

0.692