Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   EL130_RS06205 Genome accession   NZ_LR134320
Coordinates   1235165..1235599 (+) Length   144 a.a.
NCBI ID   WP_002263292.1    Uniprot ID   Q8DUK6
Organism   Streptococcus mutans strain NCTC10832     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1230165..1240599
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL130_RS06175 (NCTC10832_01190) gdhA 1230348..1231697 (+) 1350 WP_002283872.1 NADP-specific glutamate dehydrogenase -
  EL130_RS06180 (NCTC10832_01191) - 1231809..1232192 (-) 384 WP_002265142.1 DUF3021 family protein -
  EL130_RS06185 (NCTC10832_01192) queF 1232301..1232789 (-) 489 WP_002265143.1 preQ(1) synthase -
  EL130_RS06190 (NCTC10832_01193) queE 1232802..1233518 (-) 717 WP_002283871.1 7-carboxy-7-deazaguanine synthase QueE -
  EL130_RS06195 (NCTC10832_01194) queD 1233515..1233961 (-) 447 WP_002266457.1 6-carboxytetrahydropterin synthase QueD -
  EL130_RS06200 (NCTC10832_01195) queC 1233961..1234614 (-) 654 WP_002283870.1 7-cyano-7-deazaguanine synthase QueC -
  EL130_RS06205 (NCTC10832_01196) rcrR 1235165..1235599 (+) 435 WP_002263292.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  EL130_RS06210 (NCTC10832_01197) rcrP 1235603..1237405 (+) 1803 WP_002283869.1 ABC transporter ATP-binding protein Regulator
  EL130_RS06215 (NCTC10832_01198) rcrQ 1237395..1239149 (+) 1755 WP_002275251.1 ABC transporter ATP-binding protein Regulator
  EL130_RS06220 (NCTC10832_01199) tpx 1239346..1239831 (+) 486 WP_002283868.1 thiol peroxidase -
  EL130_RS06225 - 1239968..1240437 (+) 470 Protein_1142 hypothetical protein -

Sequence

Protein


Download         Length: 144 a.a.        Molecular weight: 16720.58 Da        Isoelectric Point: 10.5126

>NTDB_id=1001591 EL130_RS06205 WP_002263292.1 1235165..1235599(+) (rcrR) [Streptococcus mutans strain NCTC10832]
MKEPFSEFKNLITATERYIQELSKSHGVEHLSGPQGWTVMFLKDNQGKEIFIKDIEKRLDISKSVTSNLIKRMEKNGFIS
VIPSRKDRRYKQIVLTPLGQEKAGKITVFLTDLKKLLLKDISQEDLSVARKVFKQIKQNLEKKE

Nucleotide


Download         Length: 435 bp        

>NTDB_id=1001591 EL130_RS06205 WP_002263292.1 1235165..1235599(+) (rcrR) [Streptococcus mutans strain NCTC10832]
ATGAAGGAGCCTTTTAGTGAATTTAAAAACCTCATTACAGCAACAGAAAGATATATTCAAGAATTATCCAAAAGCCATGG
TGTTGAACATCTGTCCGGACCTCAGGGATGGACAGTTATGTTTTTAAAGGATAATCAAGGAAAGGAAATTTTTATTAAAG
ATATTGAAAAAAGGTTAGATATCTCAAAATCTGTGACCAGTAATCTCATTAAACGAATGGAAAAAAATGGTTTTATTTCT
GTTATTCCTTCCAGAAAAGACAGACGATACAAGCAAATTGTTTTAACGCCATTAGGTCAGGAAAAAGCCGGAAAAATAAC
TGTTTTTTTAACAGATCTTAAAAAGTTGCTTCTAAAAGATATTAGTCAGGAAGACTTATCAGTTGCTCGAAAGGTTTTTA
AACAAATCAAACAAAATTTAGAAAAGAAGGAGTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(31-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8DUK6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

100

100

1