Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | ABFK61_RS07520 | Genome accession | NZ_CP156041 |
| Coordinates | 1572423..1572983 (-) | Length | 186 a.a. |
| NCBI ID | WP_002194578.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain D78 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1567423..1577983
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABFK61_RS07510 (ABFK61_07510) | pilX | 1570606..1571424 (-) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| ABFK61_RS07515 (ABFK61_07515) | pilW | 1571421..1572422 (-) | 1002 | WP_000079197.1 | PilW family protein | Machinery gene |
| ABFK61_RS07520 (ABFK61_07520) | pilV | 1572423..1572983 (-) | 561 | WP_002194578.1 | type IV pilus modification protein PilV | Machinery gene |
| ABFK61_RS07525 (ABFK61_07525) | fimU | 1572977..1573450 (-) | 474 | WP_001214060.1 | GspH/FimT family pseudopilin | Machinery gene |
| ABFK61_RS07530 (ABFK61_07530) | ispH | 1573620..1574570 (-) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| ABFK61_RS07535 (ABFK61_07535) | gmk | 1574693..1575322 (+) | 630 | WP_000015937.1 | guanylate kinase | - |
| ABFK61_RS07540 (ABFK61_07540) | rpoZ | 1575395..1575673 (+) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| ABFK61_RS07545 (ABFK61_07545) | - | 1575712..1575842 (+) | 131 | Protein_1471 | hypothetical protein | - |
Sequence
Protein
Download Length: 186 a.a. Molecular weight: 20162.12 Da Isoelectric Point: 8.2247
>NTDB_id=1001485 ABFK61_RS07520 WP_002194578.1 1572423..1572983(-) (pilV) [Acinetobacter baumannii strain D78]
MLMHHYKQKAQAGVGLLEVLVALILLAIGVLGYVALQLRAMDASSEALSKSQAILVMRGLAENIRTNSTQASQYPTFVRS
YSNYTSDTPAPTSCFNSLCTASQLAQFDAYQAARNANQLGMRITMSNCPGVTNTMVQQRQCLFVFWGKTAPVITTNGTNT
SVDVSSCMSNNGVYVNNSTCLMMEAY
MLMHHYKQKAQAGVGLLEVLVALILLAIGVLGYVALQLRAMDASSEALSKSQAILVMRGLAENIRTNSTQASQYPTFVRS
YSNYTSDTPAPTSCFNSLCTASQLAQFDAYQAARNANQLGMRITMSNCPGVTNTMVQQRQCLFVFWGKTAPVITTNGTNT
SVDVSSCMSNNGVYVNNSTCLMMEAY
Nucleotide
Download Length: 561 bp
>NTDB_id=1001485 ABFK61_RS07520 WP_002194578.1 1572423..1572983(-) (pilV) [Acinetobacter baumannii strain D78]
TTGTTAATGCATCACTATAAGCAAAAAGCCCAAGCTGGGGTGGGTTTACTCGAAGTTTTGGTTGCCTTAATTTTACTTGC
TATTGGAGTTTTAGGTTATGTTGCCTTGCAGCTAAGAGCTATGGATGCCTCTTCAGAAGCATTAAGTAAATCTCAAGCCA
TTCTAGTGATGAGGGGATTAGCAGAAAATATCCGTACAAATAGTACTCAAGCTAGCCAGTATCCTACATTTGTGCGTAGT
TATAGCAACTATACATCTGATACTCCTGCACCCACGTCATGTTTTAACTCTCTATGTACTGCCTCCCAACTTGCTCAATT
TGATGCCTATCAAGCAGCTAGAAATGCTAATCAACTGGGTATGAGAATTACGATGTCAAATTGCCCTGGCGTTACAAATA
CAATGGTGCAACAACGCCAGTGCCTATTTGTCTTTTGGGGTAAAACTGCGCCAGTGATTACTACAAATGGAACAAATACT
AGTGTGGATGTTTCAAGTTGTATGAGTAATAACGGTGTTTACGTGAATAATTCAACTTGCTTAATGATGGAGGCATATTA
A
TTGTTAATGCATCACTATAAGCAAAAAGCCCAAGCTGGGGTGGGTTTACTCGAAGTTTTGGTTGCCTTAATTTTACTTGC
TATTGGAGTTTTAGGTTATGTTGCCTTGCAGCTAAGAGCTATGGATGCCTCTTCAGAAGCATTAAGTAAATCTCAAGCCA
TTCTAGTGATGAGGGGATTAGCAGAAAATATCCGTACAAATAGTACTCAAGCTAGCCAGTATCCTACATTTGTGCGTAGT
TATAGCAACTATACATCTGATACTCCTGCACCCACGTCATGTTTTAACTCTCTATGTACTGCCTCCCAACTTGCTCAATT
TGATGCCTATCAAGCAGCTAGAAATGCTAATCAACTGGGTATGAGAATTACGATGTCAAATTGCCCTGGCGTTACAAATA
CAATGGTGCAACAACGCCAGTGCCTATTTGTCTTTTGGGGTAAAACTGCGCCAGTGATTACTACAAATGGAACAAATACT
AGTGTGGATGTTTCAAGTTGTATGAGTAATAACGGTGTTTACGTGAATAATTCAACTTGCTTAATGATGGAGGCATATTA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |
| pilV | Acinetobacter baylyi ADP1 |
41.398 |
100 |
0.414 |