Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   EL139_RS07800 Genome accession   NZ_LR134316
Coordinates   1557268..1557747 (+) Length   159 a.a.
NCBI ID   WP_003058929.1    Uniprot ID   A0ABU0AAE0
Organism   Streptococcus dysgalactiae subsp. equisimilis strain NCTC6181     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1552268..1562747
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL139_RS07770 (NCTC6181_01583) rfbA 1553127..1553996 (+) 870 WP_111716814.1 glucose-1-phosphate thymidylyltransferase RfbA -
  EL139_RS07775 (NCTC6181_01584) - 1553996..1554589 (+) 594 WP_111716812.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  EL139_RS07780 (NCTC6181_01585) rfbB 1554833..1555876 (+) 1044 WP_111716810.1 dTDP-glucose 4,6-dehydratase -
  EL139_RS07785 (NCTC6181_01586) - 1556065..1556355 (+) 291 WP_111716808.1 hypothetical protein -
  EL139_RS07790 (NCTC6181_01587) - 1556339..1556791 (+) 453 WP_231871974.1 CPBP family intramembrane glutamic endopeptidase -
  EL139_RS07795 (NCTC6181_01588) - 1556881..1557072 (-) 192 WP_003058922.1 hypothetical protein -
  EL139_RS07800 (NCTC6181_01589) mutX 1557268..1557747 (+) 480 WP_003058929.1 8-oxo-dGTP diphosphatase Machinery gene
  EL139_RS07805 (NCTC6181_01590) - 1557796..1558977 (+) 1182 WP_111716806.1 AI-2E family transporter -
  EL139_RS07810 (NCTC6181_01591) - 1558967..1560214 (+) 1248 WP_111716804.1 hypothetical protein -
  EL139_RS07815 (NCTC6181_01592) - 1560277..1561929 (-) 1653 WP_111716802.1 NFACT family protein -
  EL139_RS07820 (NCTC6181_01593) - 1562105..1562476 (+) 372 WP_111716799.1 hypothetical protein -

Sequence

Protein


Download         Length: 159 a.a.        Molecular weight: 18574.75 Da        Isoelectric Point: 4.2471

>NTDB_id=1001387 EL139_RS07800 WP_003058929.1 1557268..1557747(+) (mutX) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC6181]
MTQLATICYIDNGESLLLLHRNKKENDVHEGKWISVGGKLEAGETPDECARREILEETHLTVTEMAFKGIITFPEFTPGH
DWYTYVFKVTGFEGDLISDEESREGTLEWVPYNQVLEKPTWEGDYDIFKWILEDRPFFSAKFTYNETNQLIEKSVTFYD

Nucleotide


Download         Length: 480 bp        

>NTDB_id=1001387 EL139_RS07800 WP_003058929.1 1557268..1557747(+) (mutX) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC6181]
ATGACCCAATTGGCAACTATTTGTTATATTGATAATGGCGAGTCCTTGCTATTATTACACCGCAATAAAAAAGAAAATGA
TGTCCACGAAGGGAAGTGGATTTCAGTTGGAGGTAAGCTTGAAGCGGGAGAAACCCCAGATGAGTGTGCCCGTCGTGAGA
TTCTAGAGGAAACCCATTTGACCGTTACAGAGATGGCTTTTAAAGGAATCATTACTTTTCCAGAATTCACACCAGGTCAT
GATTGGTATACCTATGTTTTTAAAGTAACAGGATTTGAAGGAGACCTCATTTCCGATGAGGAGTCACGTGAAGGCACCCT
GGAATGGGTACCATATAATCAGGTATTGGAAAAACCGACATGGGAAGGGGATTATGACATTTTTAAATGGATTTTAGAAG
ACCGCCCCTTTTTTTCTGCCAAATTTACCTACAATGAAACTAACCAACTTATTGAGAAATCCGTCACCTTTTATGACTGA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

68.553

100

0.686

Multiple sequence alignment