Detailed information
Bioinformatically predicted
Overview
| Name | comK | Type | Regulator |
| Locus tag | ABFV68_RS05310 | Genome accession | NZ_CP156029 |
| Coordinates | 1029138..1029716 (+) | Length | 192 a.a. |
| NCBI ID | WP_003155179.1 | Uniprot ID | G1BIW7 |
| Organism | Bacillus velezensis strain CH1 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1024138..1034716
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABFV68_RS05290 (ABFV68_05290) | - | 1024639..1025931 (-) | 1293 | WP_007409192.1 | globin-coupled sensor protein | - |
| ABFV68_RS05295 (ABFV68_05295) | - | 1026053..1027576 (-) | 1524 | WP_346988074.1 | FAD-dependent oxidoreductase | - |
| ABFV68_RS05300 (ABFV68_05300) | - | 1027701..1028558 (+) | 858 | WP_221664047.1 | SDR family oxidoreductase | - |
| ABFV68_RS05305 (ABFV68_05305) | - | 1028589..1028822 (-) | 234 | WP_012117233.1 | IDEAL domain-containing protein | - |
| ABFV68_RS05310 (ABFV68_05310) | comK | 1029138..1029716 (+) | 579 | WP_003155179.1 | competence protein ComK | Regulator |
| ABFV68_RS05315 (ABFV68_05315) | - | 1029862..1030230 (+) | 369 | WP_169509724.1 | iron chaperone | - |
| ABFV68_RS05320 (ABFV68_05320) | - | 1030257..1030628 (+) | 372 | WP_221664044.1 | iron chaperone | - |
| ABFV68_RS05325 (ABFV68_05325) | - | 1030675..1031886 (-) | 1212 | WP_032866164.1 | GNAT family N-acetyltransferase | - |
| ABFV68_RS05330 (ABFV68_05330) | - | 1032043..1032753 (-) | 711 | WP_007409183.1 | YrpD family protein | - |
| ABFV68_RS05335 (ABFV68_05335) | - | 1032949..1033218 (+) | 270 | WP_003155168.1 | excalibur calcium-binding domain-containing protein | - |
| ABFV68_RS05340 (ABFV68_05340) | - | 1033251..1033568 (-) | 318 | WP_003155166.1 | YbjQ family protein | - |
Sequence
Protein
Download Length: 192 a.a. Molecular weight: 22315.58 Da Isoelectric Point: 8.1419
>NTDB_id=1001362 ABFV68_RS05310 WP_003155179.1 1029138..1029716(+) (comK) [Bacillus velezensis strain CH1]
MCQKTHAPLESYEVNRSTIAVLPEEIDGKMGSKVIEKDCILYVSMKPIHIIDRSCRYFGSSYAGRKAGTYEAIKISHKPP
IMVDPSNHIFLFPTLSSARPQCGWISHVHVKDFQPTAFDDTAVTFSNGKTMELEVSYHSFENQVYRTAYLRTTFQDRMGS
HIPKRQEFMLYPKEERTRMIYDFILRELGERY
MCQKTHAPLESYEVNRSTIAVLPEEIDGKMGSKVIEKDCILYVSMKPIHIIDRSCRYFGSSYAGRKAGTYEAIKISHKPP
IMVDPSNHIFLFPTLSSARPQCGWISHVHVKDFQPTAFDDTAVTFSNGKTMELEVSYHSFENQVYRTAYLRTTFQDRMGS
HIPKRQEFMLYPKEERTRMIYDFILRELGERY
Nucleotide
Download Length: 579 bp
>NTDB_id=1001362 ABFV68_RS05310 WP_003155179.1 1029138..1029716(+) (comK) [Bacillus velezensis strain CH1]
ATGTGCCAGAAAACACACGCACCCTTAGAAAGCTATGAAGTAAATCGTTCAACCATCGCTGTTTTGCCTGAGGAAATAGA
CGGTAAAATGGGGTCGAAGGTCATTGAAAAAGACTGCATTCTGTATGTCAGCATGAAGCCGATTCACATCATCGACAGAA
GCTGCCGCTACTTTGGCTCCAGCTATGCCGGGAGAAAAGCGGGAACATATGAAGCGATTAAAATTTCTCACAAGCCGCCG
ATTATGGTGGACCCTTCAAATCACATCTTTTTATTCCCTACACTTTCTTCTGCAAGGCCTCAATGCGGCTGGATATCTCA
TGTGCACGTTAAAGATTTTCAACCGACGGCATTTGATGACACAGCGGTCACGTTCTCAAACGGCAAAACGATGGAACTGG
AAGTATCCTATCATTCTTTTGAAAATCAGGTTTACAGAACCGCCTATCTCAGAACCACTTTTCAGGACAGGATGGGCAGT
CATATCCCGAAGCGGCAGGAATTCATGCTGTATCCGAAAGAAGAGCGGACAAGAATGATCTACGACTTTATTTTGCGGGA
GCTGGGAGAGAGATATTAG
ATGTGCCAGAAAACACACGCACCCTTAGAAAGCTATGAAGTAAATCGTTCAACCATCGCTGTTTTGCCTGAGGAAATAGA
CGGTAAAATGGGGTCGAAGGTCATTGAAAAAGACTGCATTCTGTATGTCAGCATGAAGCCGATTCACATCATCGACAGAA
GCTGCCGCTACTTTGGCTCCAGCTATGCCGGGAGAAAAGCGGGAACATATGAAGCGATTAAAATTTCTCACAAGCCGCCG
ATTATGGTGGACCCTTCAAATCACATCTTTTTATTCCCTACACTTTCTTCTGCAAGGCCTCAATGCGGCTGGATATCTCA
TGTGCACGTTAAAGATTTTCAACCGACGGCATTTGATGACACAGCGGTCACGTTCTCAAACGGCAAAACGATGGAACTGG
AAGTATCCTATCATTCTTTTGAAAATCAGGTTTACAGAACCGCCTATCTCAGAACCACTTTTCAGGACAGGATGGGCAGT
CATATCCCGAAGCGGCAGGAATTCATGCTGTATCCGAAAGAAGAGCGGACAAGAATGATCTACGACTTTATTTTGCGGGA
GCTGGGAGAGAGATATTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comK | Bacillus subtilis subsp. subtilis str. 168 |
82.292 |
100 |
0.823 |