Detailed information NTG1001298

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: EL184_RS21385
• Genome accession: NZ_LR134315
• Coordinates: 4402814..4403839 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain NCTC9064
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4397814..4408839

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL184_RS21365 (NCTC9064_04290)	metJ	4398875..4399192 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
EL184_RS21370 (NCTC9064_04291)	yiiX	4399376..4399984 (+)	609	WP_000797341.1	YiiX family permuted papain-like enzyme	-
EL184_RS21375 (NCTC9064_04292)	rpmE	4400045..4400257 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
EL184_RS21380 (NCTC9064_04293)	priA	4400460..4402658 (+)	2199	WP_001330197.1	primosomal protein N'	Machinery gene
EL184_RS21385 (NCTC9064_04294)	cytR	4402814..4403839 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
EL184_RS21390 (NCTC9064_04295)	ftsN	4403931..4404890 (+)	960	WP_089627724.1	cell division protein FtsN	-
EL184_RS21395 (NCTC9064_04296)	hslV	4404983..4405513 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
EL184_RS21400 (NCTC9064_04297)	hslU	4405523..4406854 (+)	1332	WP_096835545.1	HslU--HslV peptidase ATPase subunit	-
EL184_RS21405 (NCTC9064_04298)	menA	4406921..4407847 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
EL184_RS21410 (NCTC9064_04299)	rraA	4407940..4408425 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
EL184_RS21415 (NCTC9064_04300)	zapB	4408510..4408755 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=1001298 EL184_RS21385 WP_000644904.1 4402814..4403839(+) (cytR) [Escherichia coli strain NCTC9064]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=1001298 EL184_RS21385 WP_000644904.1 4402814..4403839(+) (cytR) [Escherichia coli strain NCTC9064]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCACTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GAATTATGGTTGATCCACAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCAGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628