Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ABFU71_RS15330 Genome accession   NZ_CP156016
Coordinates   3486474..3486875 (-) Length   133 a.a.
NCBI ID   WP_011038048.1    Uniprot ID   Q8P6P2
Organism   Xanthomonas campestris pv. raphani strain 756C     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3481474..3491875
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABFU71_RS15315 (ABFU71_15280) - 3483488..3485524 (-) 2037 WP_011038045.1 methyl-accepting chemotaxis protein -
  ABFU71_RS15320 (ABFU71_15285) - 3485564..3486094 (-) 531 WP_014508568.1 chemotaxis protein CheW -
  ABFU71_RS15325 (ABFU71_15290) - 3486094..3486456 (-) 363 WP_011038047.1 PleD family two-component system response regulator -
  ABFU71_RS15330 (ABFU71_15295) pilG 3486474..3486875 (-) 402 WP_011038048.1 twitching motility response regulator PilG Regulator
  ABFU71_RS15335 (ABFU71_15300) gshB 3487113..3488063 (+) 951 WP_014508571.1 glutathione synthase -
  ABFU71_RS15340 (ABFU71_15305) - 3488060..3488935 (+) 876 WP_014508572.1 energy transducer TonB -
  ABFU71_RS15345 (ABFU71_15310) - 3489139..3489345 (-) 207 Protein_2966 ADP-ribosylglycohydrolase family protein -
  ABFU71_RS15350 (ABFU71_15315) - 3489391..3490189 (+) 799 WP_087941979.1 IS5 family transposase -
  ABFU71_RS15355 (ABFU71_15320) - 3490201..3490914 (-) 714 Protein_2968 ADP-ribosylglycohydrolase family protein -
  ABFU71_RS15360 (ABFU71_15325) tsaB 3490914..3491633 (-) 720 WP_014508577.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14676.05 Da        Isoelectric Point: 6.3482

>NTDB_id=1001244 ABFU71_RS15330 WP_011038048.1 3486474..3486875(-) (pilG) [Xanthomonas campestris pv. raphani strain 756C]
MTENMAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=1001244 ABFU71_RS15330 WP_011038048.1 3486474..3486875(-) (pilG) [Xanthomonas campestris pv. raphani strain 756C]
ATGACTGAAAACATGGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTTATCGATGATTCGAAGACCATTCGCCG
CACTGCCGAAACGCTGCTCAAGCGCGAAGGCTGTGAAGTGGTGACAGCGACGGACGGATTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAGATCATTTTCGTGGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAGTCGACGCCGGTGATCATGTTGTCTTCCAAGGATGGCCTGTTTGACAAGGCACGCGGCCGCAT
CGTCGGCTCCGAGCAATATCTGACCAAGCCATTCACCCGTGAAGAACTACTGAGCGCGATCCGTACGTACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8P6P2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684

Multiple sequence alignment