Detailed information    

insolico Bioinformatically predicted

Overview

Name   recO   Type   Machinery gene
Locus tag   EL107_RS07605 Genome accession   NZ_LR134314
Coordinates   1494812..1495567 (-) Length   251 a.a.
NCBI ID   WP_002986719.1    Uniprot ID   A2RBY9
Organism   Streptococcus pyogenes strain NCTC8302     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1489812..1500567
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL107_RS07590 (NCTC8302_01504) purC 1492612..1493316 (-) 705 WP_027968831.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase -
  EL107_RS07595 (NCTC8302_01505) - 1493467..1493709 (-) 243 WP_002993445.1 phosphopantetheine-binding protein -
  EL107_RS07600 (NCTC8302_01506) plsX 1493702..1494709 (-) 1008 WP_011184059.1 phosphate acyltransferase PlsX -
  EL107_RS07605 (NCTC8302_01507) recO 1494812..1495567 (-) 756 WP_002986719.1 DNA repair protein RecO Machinery gene
  EL107_RS07610 (NCTC8302_01508) - 1495753..1496715 (-) 963 WP_002986722.1 ribose-phosphate diphosphokinase -
  EL107_RS07615 (NCTC8302_01509) pcsB 1496968..1498164 (-) 1197 WP_011017226.1 peptidoglycan hydrolase PcsB -

Sequence

Protein


Download         Length: 251 a.a.        Molecular weight: 29516.97 Da        Isoelectric Point: 6.9077

>NTDB_id=1001211 EL107_RS07605 WP_002986719.1 1494812..1495567(-) (recO) [Streptococcus pyogenes strain NCTC8302]
MQLTESLGIVLFNRNYREDDKLVKIFTEVAGKQMFFVKHISRSKMSSIIQPLTIADFIFKLNDTGLSYVVDYSNVNTYRY
INNDIFRLAYASYVLALADAAIADNESDSHLFTFLKKTLDLMEEGLDYEILTNIFEIQILDRFGISLNFHECAICHRTDL
PLDFSHRFSAVLCSEHYYKDNRRNHLDPNVIYLLSRFQKITFDDLRTISLNKDIKKKLRQFIDELYHDYVGIKLKSKTFI
DNLVKWGDIMK

Nucleotide


Download         Length: 756 bp        

>NTDB_id=1001211 EL107_RS07605 WP_002986719.1 1494812..1495567(-) (recO) [Streptococcus pyogenes strain NCTC8302]
ATGCAACTAACAGAATCACTAGGCATTGTTCTTTTTAATAGGAATTATCGAGAAGATGATAAATTAGTCAAAATATTTAC
TGAAGTAGCAGGTAAGCAGATGTTTTTCGTGAAACATATTAGTCGTTCCAAAATGTCCTCAATCATTCAACCACTAACGA
TTGCTGATTTTATTTTCAAGTTAAATGATACAGGCTTGTCTTATGTTGTTGACTATAGTAACGTTAACACTTATCGGTAT
ATTAATAATGATATTTTTCGATTAGCCTATGCTAGTTATGTCTTAGCATTAGCTGATGCTGCGATTGCAGATAATGAATC
AGATTCGCATTTGTTTACGTTTTTGAAAAAAACACTTGATTTGATGGAAGAGGGCCTAGATTATGAAATTTTGACAAATA
TTTTTGAAATTCAGATATTAGATCGTTTTGGTATTAGTCTAAACTTTCATGAGTGTGCCATTTGTCATCGTACTGATTTA
CCACTTGATTTTTCCCATCGTTTTTCAGCTGTACTTTGTTCTGAACATTATTACAAAGACAACCGACGTAATCATTTAGA
TCCAAATGTTATCTACTTGTTGAGTCGATTTCAAAAAATCACATTTGATGATTTGAGAACTATTTCATTGAATAAAGACA
TCAAAAAGAAGCTTCGTCAGTTCATTGATGAGTTGTATCACGACTATGTAGGAATCAAATTAAAAAGTAAAACATTCATT
GATAATTTAGTTAAGTGGGGAGATATTATGAAATGA

Domains

Predicted by InterProScan.

Recombination protein O C terminal (RecO_C)

(83-237)

Recombination protein O N terminal (RecO_N)

(1-73)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A2RBY9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recO Streptococcus pneumoniae R6

60.159

100

0.602