Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ABFU20_RS15445 Genome accession   NZ_CP155963
Coordinates   3483431..3483832 (-) Length   133 a.a.
NCBI ID   WP_011038048.1    Uniprot ID   Q8P6P2
Organism   Xanthomonas campestris pv. raphani strain BR66     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3478431..3488832
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABFU20_RS15430 (ABFU20_15385) - 3480445..3482481 (-) 2037 WP_011038045.1 methyl-accepting chemotaxis protein -
  ABFU20_RS15435 (ABFU20_15390) - 3482521..3483051 (-) 531 WP_014508568.1 chemotaxis protein CheW -
  ABFU20_RS15440 (ABFU20_15395) - 3483051..3483413 (-) 363 WP_011038047.1 PleD family two-component system response regulator -
  ABFU20_RS15445 (ABFU20_15400) pilG 3483431..3483832 (-) 402 WP_011038048.1 twitching motility response regulator PilG Regulator
  ABFU20_RS15450 (ABFU20_15405) gshB 3484070..3485020 (+) 951 WP_014508571.1 glutathione synthase -
  ABFU20_RS15455 (ABFU20_15410) - 3485017..3485892 (+) 876 WP_014508572.1 energy transducer TonB -
  ABFU20_RS15460 (ABFU20_15415) - 3486096..3486302 (-) 207 Protein_2989 ADP-ribosylglycohydrolase family protein -
  ABFU20_RS15465 (ABFU20_15420) - 3486348..3487146 (+) 799 WP_087941979.1 IS5 family transposase -
  ABFU20_RS15470 (ABFU20_15425) - 3487158..3487871 (-) 714 Protein_2991 ADP-ribosylglycohydrolase family protein -
  ABFU20_RS15475 (ABFU20_15430) tsaB 3487871..3488590 (-) 720 WP_014508577.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14676.05 Da        Isoelectric Point: 6.3482

>NTDB_id=1000362 ABFU20_RS15445 WP_011038048.1 3483431..3483832(-) (pilG) [Xanthomonas campestris pv. raphani strain BR66]
MTENMAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=1000362 ABFU20_RS15445 WP_011038048.1 3483431..3483832(-) (pilG) [Xanthomonas campestris pv. raphani strain BR66]
ATGACTGAAAACATGGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTTATCGATGATTCGAAGACCATTCGCCG
CACTGCCGAAACGCTGCTCAAGCGCGAAGGCTGTGAAGTGGTGACAGCGACGGACGGATTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAGATCATTTTCGTGGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAGTCGACGCCGGTGATCATGTTGTCTTCCAAGGATGGCCTGTTTGACAAGGCACGCGGCCGCAT
CGTCGGCTCCGAGCAATATCTGACCAAGCCATTCACCCGTGAAGAACTACTGAGCGCGATCCGTACGTACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8P6P2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684

Multiple sequence alignment