Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   EL084_RS02730 Genome accession   NZ_LR134292
Coordinates   551226..551711 (+) Length   161 a.a.
NCBI ID   WP_021142040.1    Uniprot ID   -
Organism   Streptococcus equinus strain NCTC10389     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 546226..556711
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL084_RS02700 (NCTC10389_00579) - 546241..546924 (+) 684 WP_044023401.1 tRNA (adenine(22)-N(1))-methyltransferase -
  EL084_RS02705 (NCTC10389_00580) - 546914..547702 (+) 789 WP_126440080.1 Nif3-like dinuclear metal center hexameric protein -
  EL084_RS02710 (NCTC10389_00581) rfbA 547836..548705 (+) 870 WP_004231150.1 glucose-1-phosphate thymidylyltransferase RfbA -
  EL084_RS02715 (NCTC10389_00582) - 548705..549301 (+) 597 WP_004231151.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  EL084_RS02720 (NCTC10389_00583) rfbB 549477..550523 (+) 1047 WP_126440081.1 dTDP-glucose 4,6-dehydratase -
  EL084_RS02725 (NCTC10389_00584) - 550649..551071 (+) 423 WP_126440082.1 HD domain-containing protein -
  EL084_RS02730 (NCTC10389_00585) mutX 551226..551711 (+) 486 WP_021142040.1 NUDIX hydrolase Machinery gene
  EL084_RS02735 (NCTC10389_00586) - 551747..552934 (+) 1188 WP_126440083.1 AI-2E family transporter -
  EL084_RS02740 (NCTC10389_00587) - 552924..554159 (+) 1236 WP_004231160.1 tetratricopeptide repeat protein -
  EL084_RS02745 (NCTC10389_00588) - 554143..554325 (+) 183 WP_115255041.1 sec-independent periplasmic protein translocation protein TatC -
  EL084_RS02750 (NCTC10389_00589) alsS 554580..556253 (+) 1674 WP_044023251.1 acetolactate synthase AlsS -

Sequence

Protein


Download         Length: 161 a.a.        Molecular weight: 18880.21 Da        Isoelectric Point: 4.3823

>NTDB_id=1000321 EL084_RS02730 WP_021142040.1 551226..551711(+) (mutX) [Streptococcus equinus strain NCTC10389]
MTKLATICYIDNGEALLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECAKREIFEETHFIVKEMDFKGVITFPEFTPGH
DWYTYVFKVTDFEGELISDEESREGTLEWVPYDKVLSKPTWEGDYEIFKWILDDVPFFSAKFTYDDQQRLVDKSVTFYDN
K

Nucleotide


Download         Length: 486 bp        

>NTDB_id=1000321 EL084_RS02730 WP_021142040.1 551226..551711(+) (mutX) [Streptococcus equinus strain NCTC10389]
ATGACAAAGTTAGCAACGATTTGTTATATTGATAATGGTGAGGCACTTTTGCTTTTGCACCGTAATAAAAAGCCAAATGA
TGTTCATGAAGGAAAATGGATCTCAGTTGGTGGTAAGCTTGAAGCAGGTGAGACTCCTGATGAATGCGCAAAGCGGGAAA
TTTTTGAAGAAACTCATTTTATCGTCAAAGAAATGGACTTTAAGGGAGTGATTACTTTCCCAGAATTTACGCCTGGTCAT
GATTGGTACACTTATGTGTTTAAAGTGACTGATTTTGAGGGTGAGTTGATTTCTGATGAGGAATCACGTGAAGGAACATT
GGAATGGGTTCCTTATGATAAAGTTCTTTCAAAACCAACTTGGGAAGGTGATTACGAAATCTTTAAGTGGATTTTGGATG
ATGTTCCATTCTTTTCAGCTAAATTTACTTATGATGACCAACAACGTTTAGTTGATAAAAGTGTCACTTTCTATGATAAT
AAGTAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(4-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

69.811

98.758

0.689