Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   EL092_RS06250 Genome accession   NZ_LR134291
Coordinates   1296510..1296974 (-) Length   154 a.a.
NCBI ID   WP_002904550.1    Uniprot ID   A0ABM5NIU9
Organism   Streptococcus gordonii strain NCTC7868     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1291510..1301974
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL092_RS06235 (NCTC7868_01241) plsY 1292240..1292884 (+) 645 WP_012000642.1 glycerol-3-phosphate 1-O-acyltransferase PlsY -
  EL092_RS06240 (NCTC7868_01242) nt5e 1292902..1295088 (-) 2187 WP_012000643.1 cell surface ecto-5'-nucleotidase Nt5e -
  EL092_RS06245 (NCTC7868_01243) - 1295229..1296497 (-) 1269 WP_012000644.1 dihydroorotase -
  EL092_RS06250 (NCTC7868_01244) mutX 1296510..1296974 (-) 465 WP_002904550.1 NUDIX hydrolase Machinery gene
  EL092_RS06255 (NCTC7868_01245) - 1296983..1297636 (-) 654 WP_012000645.1 uracil-DNA glycosylase -
  EL092_RS06260 (NCTC7868_01246) - 1297671..1298423 (-) 753 WP_012000646.1 DUF4336 domain-containing protein -
  EL092_RS06265 (NCTC7868_01247) - 1298426..1299979 (-) 1554 WP_041789697.1 glycosyltransferase family 39 protein -
  EL092_RS06270 (NCTC7868_01248) pyrE 1300114..1300743 (-) 630 WP_012000648.1 orotate phosphoribosyltransferase -
  EL092_RS06275 (NCTC7868_01249) pyrF 1300823..1301515 (-) 693 WP_012000649.1 orotidine-5'-phosphate decarboxylase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17831.21 Da        Isoelectric Point: 4.3092

>NTDB_id=1000210 EL092_RS06250 WP_002904550.1 1296510..1296974(-) (mutX) [Streptococcus gordonii strain NCTC7868]
MVQLATICYIDNGREFLMLHRNKKPNDVHAGKWIGVGGKLERGETPQECAAREILEETGLKAKPVLKGVITFPEFTPDLD
WYTYVFKVTEFEGELIDCNEGTLEWVPYDQVLSKPTWEGDHTFVEWLLEDKPFFSAKFVYDGDKLLDTQVDFYE

Nucleotide


Download         Length: 465 bp        

>NTDB_id=1000210 EL092_RS06250 WP_002904550.1 1296510..1296974(-) (mutX) [Streptococcus gordonii strain NCTC7868]
ATGGTTCAGTTAGCAACGATTTGTTATATTGATAATGGTCGGGAGTTTCTCATGCTACACCGCAACAAAAAGCCCAACGA
CGTTCATGCTGGGAAGTGGATTGGTGTCGGTGGCAAACTAGAGCGAGGAGAGACCCCGCAAGAATGCGCTGCACGTGAGA
TTTTAGAGGAAACAGGGCTAAAGGCCAAGCCTGTTCTCAAAGGTGTTATTACTTTTCCAGAATTTACTCCCGACTTGGAC
TGGTACACCTATGTTTTCAAGGTGACTGAGTTTGAGGGGGAACTGATTGACTGCAATGAAGGGACTTTGGAATGGGTGCC
CTATGACCAGGTTTTATCTAAACCAACCTGGGAAGGCGATCATACTTTTGTTGAGTGGCTTTTAGAAGACAAGCCTTTCT
TTTCAGCAAAGTTTGTTTATGACGGGGATAAGCTCTTGGATACGCAGGTGGACTTTTACGAATAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(4-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

94.805

100

0.948