Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   EL092_RS03155 Genome accession   NZ_LR134291
Coordinates   667963..668739 (-) Length   258 a.a.
NCBI ID   WP_012000106.1    Uniprot ID   A8AVW9
Organism   Streptococcus gordonii strain NCTC7868     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 662963..673739
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL092_RS03145 (NCTC7868_00623) - 666907..667224 (-) 318 WP_008809152.1 DUF960 domain-containing protein -
  EL092_RS03150 (NCTC7868_00624) - 667340..667873 (-) 534 WP_012000105.1 DUF402 domain-containing protein -
  EL092_RS03155 (NCTC7868_00625) recX 667963..668739 (-) 777 WP_012000106.1 recombination regulator RecX Regulator
  EL092_RS03160 (NCTC7868_00626) - 668766..669542 (-) 777 WP_041789575.1 aminoglycoside 3'-phosphotransferase -
  EL092_RS03165 (NCTC7868_00627) rlmD 669598..670968 (+) 1371 WP_041789577.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  EL092_RS03170 (NCTC7868_00628) - 671168..671872 (-) 705 WP_012000110.1 MIP/aquaporin family protein -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 30491.58 Da        Isoelectric Point: 7.3834

>NTDB_id=1000183 EL092_RS03155 WP_012000106.1 667963..668739(-) (recX) [Streptococcus gordonii strain NCTC7868]
MKITKIEKKKRLYLLELDDSEKLYITEDTIVHFMLSRGMEITDQELSEIQDYAQFSYGKNLALYHLSFKQRTTKEVKDYL
TRHDIQPETISQVLDNLKKDNWVNDRKYANSFIQSNLLTGDKGTFVLKQKLTQKGISSTIIEEELSQFDFTELTDKVAEK
LLKKYQGKLPSKALQDKLLQSLINKGFSYSQAKTAYQHLDIEEDQENQEELLYKELDKQYRKYSKKYDGYDLKQRLTQAL
ARKGYDYSDISSVLRDYF

Nucleotide


Download         Length: 777 bp        

>NTDB_id=1000183 EL092_RS03155 WP_012000106.1 667963..668739(-) (recX) [Streptococcus gordonii strain NCTC7868]
ATGAAAATTACAAAAATCGAAAAGAAAAAAAGACTCTACCTCTTGGAGTTGGACGACAGTGAAAAGCTCTATATCACAGA
AGACACTATTGTCCACTTCATGCTGTCTAGAGGGATGGAAATCACGGATCAGGAGCTATCAGAAATTCAAGACTATGCGC
AATTTTCTTACGGAAAAAATCTAGCTCTCTACCATCTCTCCTTTAAGCAAAGAACTACTAAGGAAGTTAAAGACTACTTA
ACGCGGCACGACATCCAACCGGAAACCATCAGCCAGGTCCTGGACAATCTAAAAAAGGATAATTGGGTTAATGATAGAAA
GTATGCTAATTCTTTTATCCAATCCAACCTTCTCACTGGTGACAAAGGCACTTTTGTTCTAAAGCAAAAGCTCACGCAAA
AAGGAATTTCTAGCACTATCATAGAAGAAGAATTGAGCCAGTTTGATTTCACTGAATTAACAGACAAGGTTGCCGAAAAA
CTTCTCAAAAAATACCAGGGAAAACTGCCCAGCAAGGCCTTACAAGATAAACTTCTTCAATCCTTGATAAACAAAGGTTT
TTCCTATAGCCAAGCCAAAACCGCCTATCAACATTTGGACATCGAAGAAGACCAAGAGAACCAAGAAGAGCTACTCTATA
AAGAATTAGACAAGCAATACCGCAAGTACTCAAAAAAGTACGACGGCTATGACTTAAAACAACGTCTGACCCAAGCACTA
GCACGCAAAGGTTATGATTACTCTGACATCTCTAGCGTTCTGAGAGATTATTTCTAA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(80-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A8AVW9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

34.831

100

0.36

Multiple sequence alignment