NT genes of 'Avibacterium paragallinarum strain ADL-AP07'


In this species, transformation by exogenous DNA is regulated by the presence of a specific Uptake Signal Sequence (USS) (PMID: 17038178).
Evidence:

Gene name Gene type Function Related MGE Organism Genome accession Locus tag Protein ID
insolico comE1/comEA Machinery gene DNA binding and uptake - Avibacterium paragallinarum strain ADL-AP07 NZ_CP051640 HHJ58_RS00910 WP_035685388.1
insolico ssb Machinery gene DNA processing Prophage Avibacterium paragallinarum strain ADL-AP07 NZ_CP051640 HHJ58_RS01285 WP_035689249.1
insolico rec2 Machinery gene DNA binding and uptake - Avibacterium paragallinarum strain ADL-AP07 NZ_CP051640 HHJ58_RS02215 WP_081637512.1
insolico ssb Machinery gene DNA processing - Avibacterium paragallinarum strain ADL-AP07 NZ_CP051640 HHJ58_RS06145 WP_035687806.1
insolico comE Machinery gene DNA binding and uptake Genomic island Avibacterium paragallinarum strain ADL-AP07 NZ_CP051640 HHJ58_RS06590 WP_035688106.1
insolico ssb Machinery gene DNA processing Prophage Avibacterium paragallinarum strain ADL-AP07 NZ_CP051640 HHJ58_RS06720 WP_035688057.1
insolico ssb Machinery gene DNA processing Prophage Avibacterium paragallinarum strain ADL-AP07 NZ_CP051640 HHJ58_RS06970 WP_035689249.1
insolico pilC Machinery gene DNA binding and uptake - Avibacterium paragallinarum strain ADL-AP07 NZ_CP051640 HHJ58_RS07625 WP_081637525.1
insolico pilB Machinery gene DNA binding and uptake - Avibacterium paragallinarum strain ADL-AP07 NZ_CP051640 HHJ58_RS07795 WP_035687022.1
insolico pilA Machinery gene DNA binding and uptake - Avibacterium paragallinarum strain ADL-AP07 NZ_CP051640 HHJ58_RS07800 WP_035687024.1
insolico dprA Machinery gene DNA processing - Avibacterium paragallinarum strain ADL-AP07 NZ_CP051640 HHJ58_RS08580 WP_035687998.1
insolico comN Machinery gene DNA binding and uptake - Avibacterium paragallinarum strain ADL-AP07 NZ_CP051640 HHJ58_RS08760 WP_017806950.1
insolico comM Machinery gene Involve in natural transformation - Avibacterium paragallinarum strain ADL-AP07 NZ_CP051640 HHJ58_RS09570 WP_035686457.1
insolico recA Machinery gene Homologous recombination IS/Tn Avibacterium paragallinarum strain ADL-AP07 NZ_CP051640 HHJ58_RS11090 WP_035687924.1

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    experimental Experimentally validated     insolico Bioinformatically predicted