ICEberg
Browse by ICE    |    Browse by Organism   |    Browse by ICE family
ICE family: Tn1806
We selected Tn1806 as a reference and defined Tn1806 family. We classified ICE that has significant sequence alignment and syntenic 'core' structure with Tn1806 into this family.

#IDICE nameStrainReplicon
1181 in_silico 10750-RD.2Streptococcus pyogenes MGAS10750NC_008024
2409 experimental ICESp1108Streptococcus pyogenes C1-
3410 in_silico ICEFma29328-1Finegoldia magna ATCC 29328NC_010376
4411 in_silico ICEAurCol10a-1Aerococcus urinae ACS-120-V-Col10aNC_015278
5412 in_silico Tn1806Streptococcus pneumoniae AP200NC_014494
experimental Data derived from experimental literature
in_silico Putative ICEs predicted by bioinformatic methods
(1) Brenciani A et al. (2011). Two distinct genetic elements are responsible for erm(TR)-mediated erythromycin resistance in tetracycline-susceptible and tetracycline-resistant strains of Streptococcus pyogenes. Antimicrob Agents Chemother. 55(5):2106-12. [PudMed:21343455] experimental
(2) Camilli R et al. (2008). New genetic element carrying the erythromycin resistance determinant erm(TR) in Streptococcus pneumoniae. Antimicrob Agents Chemother. 52(2):619-25. [PudMed:18070957]
(3) Beres SB et al. (2007). Contribution of exogenous genetic elements to the group A Streptococcus metagenome. PLoS One. 2(8):e800. [PudMed:17726530]
 
experimental experimental literature

Genomics & Bioinformatics Group in MML, SJTU