| ICE family: Tn1806 | ||||
| We selected Tn1806 as a reference and defined Tn1806 family. We classified ICE that has significant sequence alignment and syntenic 'core' structure with Tn1806 into this family. | ||||
| # | ID | ICE name | Strain | Replicon |
| 1 | 181  | 10750-RD.2 | Streptococcus pyogenes MGAS10750 | NC_008024 |
| 2 | 409  | ICESp1108 | Streptococcus pyogenes C1 | - |
| 3 | 410 | ICEFma29328-1 | Finegoldia magna ATCC 29328 | NC_010376 |
| 4 | 411 | ICEAurCol10a-1 | Aerococcus urinae ACS-120-V-Col10a | NC_015278 |
| 5 | 412 | Tn1806 | Streptococcus pneumoniae AP200 | NC_014494 |
| Data derived from experimental literature | ||||
| Putative ICEs predicted by bioinformatic methods | ||||
| Element | No. of sequences | Download | Alignment |
| Proteins | 212 | Fasta | Multiple protein sequence alignment by MUSCLE online |
| ICEs | 5 | Fasta | Nucleotide sequence comparison by webACT |
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(1) Brenciani A et al. (2011). Two distinct genetic elements are responsible for erm(TR)-mediated erythromycin resistance in tetracycline-susceptible and tetracycline-resistant strains of Streptococcus pyogenes. Antimicrob Agents Chemother. 55(5):2106-12. [PudMed:21343455]
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| (2) Camilli R et al. (2008). New genetic element carrying the erythromycin resistance determinant erm(TR) in Streptococcus pneumoniae. Antimicrob Agents Chemother. 52(2):619-25. [PudMed:18070957] |
| (3) Beres SB et al. (2007). Contribution of exogenous genetic elements to the group A Streptococcus metagenome. PLoS One. 2(8):e800. [PudMed:17726530] |
| experimental literature |