oriTDB
The information of oriT
oriTDB accession number 300168
Name oriT_pDOC-F
oriT length 825 nt
oriT derived from oriT RP4   [100001]
GCCTGATGCGGTATTTTCTCCTTACGCATATCGACATCCGCCCTCACCGCCAGGAACGCA ACCGCAGCCTCATCACGCCGGCGCTTCTTGGCCGCGCGGGATTCAACCCACTCGGCCAGC TCGTCGGTGTAGCTCTTTGGCATCGTCTCTCGCCTGTCCCCTCAGTTCAGTAATTTCCTG CATTTGCCTGTTTCCAGTCGGTAGATATTCCACAAAACAGCAGGGAAGCAGCGCTTTTCC GCTGCATAACCCTGCTTCGGGGTCATTATAGCGATTTTTTCGGTATATCCATCCTTTTTC GCACGATATACAGGATTTTGCCAAAGGGTTCGTGTAGACTTTCCTTGGTGTATCCAACGG CGTCAGCCGGGCAGGATAGGTGAAGTAGGCCCACCCGCGAGCGGGTGTTCCTTCTTCACT GTCCCTTATTCGCACCTGGCGGTGCTCAACGGGAATCCTGCTCTGCGAGGCTGGCCGGCT ACCGCCGGCGTAACAGATGAGGGCAAGCGGATGGCTGATGAAACCAAGCCAACCAGGAAG GGCAGCCCACCTATCAAGGTGTACTGCCTTCCAGACGAACGAAGAGCGATTGAGGAAAAG GCGGCGGCGGCCGGCATGAGCCTGTCGGCCTACCTGCTGGCCGTCGGCCAGGGCTACAAA ATCACGGGCGTCGTGGACTATGAGCACGTCCGCGAGCTGGCCCGCATCAATGGCGACCTG GGCCGCCTGGGCGGCCTGCTGAAACTCTGGCTCACCGACGACCCGCGCACGGCGCGGTTC GGTGATGCCACGATCCTCGCCCTGCTGGCGAAGATCGACTCTAGC
D:
Region containing oriT
Reference
[1] Lee DJ et al (2009) Gene doctoring: a method for recombineering in laboratory and pathogenic Escherichia coli strains. BMC Microbiol. 0.55. [PMID:20003185]
Information of plasmid
ID 381
Plasmid name Recombineering donor plasmid pDOC-F
GenBank accession number GQ889496.1
Genome size 7444 bp
Coordinate of oriT  [Strand] 4518..5342
Reference
[1] Lee DJ et al (2009) Gene doctoring: a method for recombineering in laboratory and pathogenic Escherichia coli strains. BMC Microbiol. 0.55. [PMID:20003185]

Microbial Bioinformatics Group in MML, SJTU