| Bioinformatics Tools/ Databases used by oriTDB |
- PostgreSQL, an open source relational database management system
- WU-BLAST, the Washington University improved version of BLAST
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| Public database, to which oriTDB has a hyperlink path |
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| Other tools or servers of interest |
- DNAMAN,
DNA/protein multiple sequence alignment
- MUSCLE,
protein multiple sequence alignment
- HGT-DB,
horizontal gene transfer database
- ACLAME,
a classification of genetic mobile elements
- PAIDB, pathogenicity
island database
- MobilomeFINDER,
in silico and experimental discovery of bacterial genomic islands
- Dfam, database of repetitive DNA families
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