Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) bsrE-as-bsrE/-
Location 2069915..2070161 Replicon chromosome
Accession NZ_CP020102
Organism Bacillus subtilis strain NCIB 3610

Toxin (Protein)


Gene name bsrE Uniprot ID -
Locus tag B4U62_RS23065 Protein ID WP_109789044.1
Coordinates 2069915..2070007 (+) Length 31 a.a.

Antitoxin (RNA)


Gene name as-bsrE
Locus tag -
Coordinates 2069988..2070161 (-)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
B4U62_RS10335 2065074..2065409 + 336 WP_009967409.1 hypothetical protein -
B4U62_RS10340 2065456..2069061 - 3606 WP_004399367.1 membrane protein -
B4U62_RS10345 2069294..2069626 - 333 WP_026009814.1 hypothetical protein -
B4U62_RS23065 2069915..2070007 + 93 WP_109789044.1 type I toxin-antitoxin system toxin BsrE Toxin
- 2069988..2070161 - 174 - - Antitoxin
B4U62_RS10350 2070276..2071118 - 843 WP_003231327.1 hypothetical protein -
B4U62_RS10355 2071318..2071776 - 459 WP_003231326.1 type II toxin-antitoxin system antitoxin YobK -
B4U62_RS10360 2071786..2073588 - 1803 WP_004399481.1 type II toxin-antitoxin system toxin ribonuclease YobL -
B4U62_RS10365 2073690..2074247 - 558 WP_004399321.1 SMI1/KNR4 family protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
inside Prophage - - 2055900..2100383 44483


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Small toxic protein BsrE-like

(1-24)


Sequences

Toxin        


Download         Length: 31 a.a.        Molecular weight: 3358.16 Da        Isoelectric Point: 4.1840

>T74077 WP_109789044.1 NZ_CP020102:2069915-2070007 [Bacillus subtilis]
MSTFQALMLMLAIGSFIIALLTYIEKIDLP

Download         Length: 93 bp

>T74077 NZ_CP020102:2069915-2070007 [Bacillus subtilis]
ATGTCAACATTCCAGGCATTAATGCTAATGCTTGCAATCGGGTCGTTTATAATCGCCCTATTGACGTATATAGAAAAAAT
AGACCTCCCTTGA

Antitoxin


Download         Length: 174 bp

>AT74077 NZ_CP020102:c2070161-2069988 [Bacillus subtilis]
TTACAATACATTACAGTGCATTTCTTTAATGAGAAATGCATAAAATAAAAAAGACCGAGGTGCTACCAACACCCCGGCTC
TGTACAAAAAGTTGCCCATCAAAGGGCTTGCTCGATGTGGTTCTAGGTAGGCCTATCCCTTCAGGTTCTGAGGCTCAAGG
GAGGTCTATTTTTT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Download structure file

References