Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | bsrE-as-bsrE/- |
Location | 1910688..1910934 | Replicon | chromosome |
Accession | NZ_CP015975 | ||
Organism | Bacillus subtilis subsp. subtilis strain delta6 |
Toxin (Protein)
Gene name | bsrE | Uniprot ID | - |
Locus tag | A8O17_RS21110 | Protein ID | WP_109789044.1 |
Coordinates | 1910688..1910780 (+) | Length | 31 a.a. |
Antitoxin (RNA)
Gene name | as-bsrE | ||
Locus tag | - | ||
Coordinates | 1910761..1910934 (-) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
A8O17_RS09855 | 1905847..1906182 | + | 336 | WP_009967409.1 | hypothetical protein | - |
A8O17_RS09860 | 1906229..1909834 | - | 3606 | WP_004399367.1 | membrane protein | - |
A8O17_RS09865 | 1910067..1910399 | - | 333 | WP_026009814.1 | hypothetical protein | - |
A8O17_RS21110 | 1910688..1910780 | + | 93 | WP_109789044.1 | type I toxin-antitoxin system toxin BsrE | Toxin |
- | 1910761..1910934 | - | 174 | - | - | Antitoxin |
A8O17_RS09870 | 1911049..1911891 | - | 843 | WP_003231327.1 | hypothetical protein | - |
A8O17_RS09875 | 1912091..1912549 | - | 459 | WP_003231326.1 | type II toxin-antitoxin system antitoxin YobK | - |
A8O17_RS09880 | 1912559..1914361 | - | 1803 | WP_004399481.1 | type II toxin-antitoxin system toxin ribonuclease YobL | - |
A8O17_RS09885 | 1914463..1915020 | - | 558 | WP_064635421.1 | SMI1/KNR4 family protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
inside | Prophage | - | - | 1896673..1930039 | 33366 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 31 a.a. Molecular weight: 3358.16 Da Isoelectric Point: 4.1840
>T64018 WP_109789044.1 NZ_CP015975:1910688-1910780 [Bacillus subtilis subsp. subtilis]
MSTFQALMLMLAIGSFIIALLTYIEKIDLP
MSTFQALMLMLAIGSFIIALLTYIEKIDLP
Download Length: 93 bp
>T64018 NZ_CP015975:1910688-1910780 [Bacillus subtilis subsp. subtilis]
ATGTCAACATTCCAGGCATTAATGCTAATGCTTGCAATCGGGTCGTTTATAATCGCCCTATTGACGTATATAGAAAAAAT
AGACCTCCCTTGA
ATGTCAACATTCCAGGCATTAATGCTAATGCTTGCAATCGGGTCGTTTATAATCGCCCTATTGACGTATATAGAAAAAAT
AGACCTCCCTTGA
Antitoxin
Download Length: 174 bp
>AT64018 NZ_CP015975:c1910934-1910761 [Bacillus subtilis subsp. subtilis]
TTACAATACATTACAGTGCATTTCTTTAATGAGAAATGCATAAAATAAAAAAGACCGAGGTGCTACCAACACCCCGGCTC
TGTACAAAAAGTTGCCCATCAAAGGGCTTGCTCGATGTGGTTCTAGGTAGGCCTATCCCTTCAGGTTCTGAGGCTCAAGG
GAGGTCTATTTTTT
TTACAATACATTACAGTGCATTTCTTTAATGAGAAATGCATAAAATAAAAAAGACCGAGGTGCTACCAACACCCCGGCTC
TGTACAAAAAGTTGCCCATCAAAGGGCTTGCTCGATGTGGTTCTAGGTAGGCCTATCCCTTCAGGTTCTGAGGCTCAAGG
GAGGTCTATTTTTT
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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