Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) bsrE-as-bsrE/-
Location 2069643..2069889 Replicon chromosome
Accession NZ_CP010053
Organism Bacillus subtilis strain PS832

Toxin (Protein)


Gene name bsrE Uniprot ID -
Locus tag QX56_RS22740 Protein ID WP_109789044.1
Coordinates 2069643..2069735 (+) Length 31 a.a.

Antitoxin (RNA)


Gene name as-bsrE
Locus tag -
Coordinates 2069716..2069889 (-)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QX56_RS10005 2064802..2065137 + 336 WP_009967409.1 hypothetical protein -
QX56_RS10010 2065184..2068789 - 3606 WP_004399367.1 membrane protein -
QX56_RS10015 2069022..2069354 - 333 WP_026009814.1 hypothetical protein -
QX56_RS22740 2069643..2069735 + 93 WP_109789044.1 type I toxin-antitoxin system toxin BsrE Toxin
- 2069716..2069889 - 174 - - Antitoxin
QX56_RS10020 2070004..2070846 - 843 WP_003231327.1 hypothetical protein -
QX56_RS10025 2071046..2071504 - 459 WP_003231326.1 type II toxin-antitoxin system antitoxin YobK -
QX56_RS10030 2071514..2073316 - 1803 WP_004399481.1 type II toxin-antitoxin system toxin ribonuclease YobL -
QX56_RS10035 2073418..2073975 - 558 WP_004399321.1 SMI1/KNR4 family protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
inside Prophage - - 2055628..2100110 44482


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Small toxic protein BsrE-like

(1-24)


Sequences

Toxin        


Download         Length: 31 a.a.        Molecular weight: 3358.16 Da        Isoelectric Point: 4.1840

>T50302 WP_109789044.1 NZ_CP010053:2069643-2069735 [Bacillus subtilis]
MSTFQALMLMLAIGSFIIALLTYIEKIDLP

Download         Length: 93 bp

>T50302 NZ_CP010053:2069643-2069735 [Bacillus subtilis]
ATGTCAACATTCCAGGCATTAATGCTAATGCTTGCAATCGGGTCGTTTATAATCGCCCTATTGACGTATATAGAAAAAAT
AGACCTCCCTTGA

Antitoxin


Download         Length: 174 bp

>AT50302 NZ_CP010053:c2069889-2069716 [Bacillus subtilis]
TTACAATACATTACAGTGCATTTCTTTAATGAGAAATGCATAAAATAAAAAAGACCGAGGTGCTACCAACACCCCGGCTC
TGTACAAAAAGTTGCCCATCAAAGGGCTTGCTCGATGTGGTTCTAGGTAGGCCTATCCCTTCAGGTTCTGAGGCTCAAGG
GAGGTCTATTTTTT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Download structure file

References