273641

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) fst-RNAII/-
Location 312341..312535 Replicon chromosome
Accession NZ_CP118962
Organism Enterococcus faecalis strain DSM 20478

Toxin (Protein)


Gene name fst Uniprot ID -
Locus tag PYW42_RS01560 Protein ID WP_142954371.1
Coordinates 312440..312535 (-) Length 32 a.a.

Antitoxin (RNA)


Gene name RNAII
Locus tag -
Coordinates 312341..312405 (+)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
PYW42_RS01545 307965..309713 + 1749 WP_002403688.1 PTS transporter subunit EIIC -
PYW42_RS01550 309704..311737 + 2034 WP_002355275.1 BglG family transcription antiterminator -
PYW42_RS01555 311748..312182 + 435 WP_002355276.1 PTS sugar transporter subunit IIA -
- 312341..312405 + 65 - - Antitoxin
PYW42_RS01560 312440..312535 - 96 WP_142954371.1 type I toxin-antitoxin system Fst family toxin Toxin
PYW42_RS01565 312781..314553 + 1773 WP_002387897.1 PTS mannitol-specific transporter subunit IIBC -
PYW42_RS01570 314568..315005 + 438 WP_002355279.1 PTS sugar transporter subunit IIA -
PYW42_RS01575 315020..316174 + 1155 WP_002355280.1 mannitol-1-phosphate 5-dehydrogenase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
flank IS/Tn - - 316303..317106 803


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 32 a.a.        Molecular weight: 3645.44 Da        Isoelectric Point: 4.6275

>T273641 WP_142954371.1 NZ_CP118962:c312535-312440 [Enterococcus faecalis]
MYEIVTKVLVPIFVGIVLKLVTIWLEKQNEE

Download         Length: 96 bp

Antitoxin


Download         Length: 65 bp

>AT273641 NZ_CP118962:312341-312405 [Enterococcus faecalis]
CTTGTGACAAAGTCGTGCATGGATGCACTAAAAAGACACCCTATTGCGGTAGGGTGTCTTTTTTT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Download structure file

References