114800

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) sprA1-sprA1AS/-
Location 1937922..1938102 Replicon chromosome
Accession NZ_CP033987
Organism Staphylococcus aureus strain P2D1C1

Toxin (Protein)


Gene name sprA1 Uniprot ID -
Locus tag EFD76_RS09515 Protein ID WP_001801861.1
Coordinates 1937922..1938017 (+) Length 32 a.a.

Antitoxin (RNA)


Gene name sprA1AS
Locus tag -
Coordinates 1938045..1938102 (-)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
EFD76_RS09485 1933085..1933735 + 651 WP_001795210.1 excalibur calcium-binding domain-containing protein -
EFD76_RS09490 1933816..1934811 + 996 WP_000070642.1 DUF4352 domain-containing protein -
EFD76_RS09495 1934886..1935512 + 627 WP_000669024.1 hypothetical protein -
EFD76_RS09500 1935553..1935894 + 342 WP_000627540.1 DUF3969 family protein -
EFD76_RS09505 1935995..1936567 + 573 WP_000414216.1 hypothetical protein -
EFD76_RS09510 1936765..1937777 - 1013 Protein_1829 IS3 family transposase -
EFD76_RS09515 1937922..1938017 + 96 WP_001801861.1 type I toxin-antitoxin system Fst family toxin PepA1 Toxin
- 1938045..1938102 - 58 - - Antitoxin
EFD76_RS09520 1938140..1938241 + 102 WP_001792025.1 hypothetical protein -
EFD76_RS09525 1938219..1938380 - 162 Protein_1832 transposase -
EFD76_RS09530 1938371..1938865 - 495 Protein_1833 transposase -
EFD76_RS09535 1939317..1940546 - 1230 WP_000072627.1 restriction endonuclease subunit S -
EFD76_RS09540 1940539..1942095 - 1557 WP_064135920.1 type I restriction-modification system subunit M -
EFD76_RS09545 1942259..1942393 - 135 WP_001791797.1 hypothetical protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
inside Prophage - lukD / hlgA / selk 1932327..1964059 31732


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 32 a.a.        Molecular weight: 3554.32 Da        Isoelectric Point: 10.4449

>T114800 WP_001801861.1 NZ_CP033987:1937922-1938017 [Staphylococcus aureus]
VMLIFVHIIAPVISGCAIAFFSYWLSRRNTK

Download         Length: 96 bp

>T114800 NZ_CP033987:1937922-1938017 [Staphylococcus aureus]
GTGATGCTTATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCCATTGCGTTTTTTTCTTATTGGCTAAGTAG
ACGCAATACAAAATAG

Antitoxin


Download         Length: 58 bp

>AT114800 NZ_CP033987:c1938102-1938045 [Staphylococcus aureus]
AACGAAAATAAGTATTTACTTATACACCAATCCCCTCACTATTTGCGGTAGTGAGGGG

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Download structure file

References