TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Antitoxin (Protein)
| Predicted family | EcnA (AT10118) | Predicted domain | - |
| Locus tag | orf4076 | Length | 41 a.a. |
| Coordinates | 4342566..4342691 (-) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf4065 | 4338492..4339226 | + | 735 | ORF4065 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf4066 | 4339237..4339632 | + | 396 | ORF4066 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf4067 | 4339643..4340002 | + | 360 | ORF4067 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf4068 | 4340065..4341198 | + | 1134 | ORF4068 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf4069 | 4341287..4341820 | + | 534 | ORF4069 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf4070 | 4341817..4342134 | - | 318 | ORF4070 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf4071 | 4342309..4342455 | - | 147 | ORF4071 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf4072 | 4342566..4342691 | - | 126 | ORF4072 | Predicted ORF by PRODIGAL Version 1.20 | Antitoxin |
| orf4073 | 4342743..4343309 | - | 567 | ORF4073 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf4074 | 4343351..4344379 | + | 1029 | ORF4074 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf4075 | 4344769..4345638 | + | 870 | ORF4075 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf4076 | 4345688..4346041 | - | 354 | ORF4076 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Antitoxin
Ibs_toxin (Ibs) (E-value: 0.46, Score:8.6)
Sequences
Orphan Antitoxin
Download Length: Molecular weight: 4359.19 Da Isoelectric Point: 10.7587
>ORF4072 Orphan_TA_99 Antitoxin
MMKRLIVLVLLASTLLTGCNTARGFGEDIKHLGNSISRAAS
MMKRLIVLVLLASTLLTGCNTARGFGEDIKHLGNSISRAAS
Download Length: 126 bp
>ORF4072 Orphan_TA_99 Antitoxin
TTAGCTGGCAGCGCGGGAGATGGAGTTGCCGAGATGTTTGATGTCTTCGCCGAAACCGCG
AGCGGTGTTACAGCCCGTGAGCAGCGTGCTGGCAAGCAAAACAAGAACGATAAGGCGTTT
CATCAT
TTAGCTGGCAGCGCGGGAGATGGAGTTGCCGAGATGTTTGATGTCTTCGCCGAAACCGCG
AGCGGTGTTACAGCCCGTGAGCAGCGTGCTGGCAAGCAAAACAAGAACGATAAGGCGTTT
CATCAT
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| AT10118 | Xanthomonas axonopodis pv. citri str. 306 |
41.86 |
86 |
0.439 |