TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Antitoxin (Protein)
| Predicted family | sanaA (AT6033) | Predicted domain | DUF6088 |
| Locus tag | orf3891 | Length | 131 a.a. |
| Coordinates | 4137989..4138384 (+) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf3881 | 4133754..4134707 | + | 954 | ORF3881 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3882 | 4134943..4135761 | + | 819 | ORF3882 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3883 | 4135791..4136264 | + | 474 | ORF3883 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3884 | 4136285..4136599 | + | 315 | ORF3884 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3885 | 4136630..4136971 | + | 342 | ORF3885 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3886 | 4137086..4137919 | + | 834 | ORF3886 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3887 | 4137989..4138384 | + | 396 | ORF3887 | Predicted ORF by PRODIGAL Version 1.20 | Antitoxin |
| orf3888 | 4138377..4139324 | + | 948 | ORF3888 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3889 | 4139717..4140982 | + | 1266 | ORF3889 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3890 | 4141183..4142652 | - | 1470 | ORF3890 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3891 | 4142649..4143191 | - | 543 | ORF3891 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Antitoxin
No domain identified.
Sequences
Orphan Antitoxin
Download Length: Molecular weight: 14619.93 Da Isoelectric Point: 11.6915
>ORF3887 Orphan_TA_97 Antitoxin
MTIKARIQSRLKRSKRYVFTRDDFKDIAGYDQVGRVLRELVREGQLLKVGYGVYTKARRN
GITGKVMPAAPGGSSAVIVETLERLKVRYRFAGATQAYNSGTSTQIPASPEIKTPRRFKR
VLSVGNSRLNG
MTIKARIQSRLKRSKRYVFTRDDFKDIAGYDQVGRVLRELVREGQLLKVGYGVYTKARRN
GITGKVMPAAPGGSSAVIVETLERLKVRYRFAGATQAYNSGTSTQIPASPEIKTPRRFKR
VLSVGNSRLNG
Download Length: 396 bp
>ORF3887 Orphan_TA_97 Antitoxin
ATGACGATAAAAGCACGCATTCAGTCACGACTGAAACGTTCTAAACGTTACGTATTCACT
CGTGACGACTTTAAAGATATTGCAGGCTACGATCAGGTTGGTCGGGTATTGCGCGAGCTT
GTCAGGGAAGGGCAACTGTTGAAGGTTGGTTATGGCGTGTATACCAAAGCACGGCGGAAC
GGTATTACAGGCAAGGTAATGCCAGCGGCTCCCGGAGGCTCTTCAGCGGTGATTGTCGAA
ACGCTGGAACGCCTGAAAGTACGCTATCGTTTTGCTGGCGCAACGCAGGCATACAATAGC
GGTACTTCTACGCAGATCCCAGCTTCACCCGAGATAAAAACCCCCCGGCGTTTTAAACGC
GTATTATCTGTAGGGAACAGCAGATTAAATGGATGA
ATGACGATAAAAGCACGCATTCAGTCACGACTGAAACGTTCTAAACGTTACGTATTCACT
CGTGACGACTTTAAAGATATTGCAGGCTACGATCAGGTTGGTCGGGTATTGCGCGAGCTT
GTCAGGGAAGGGCAACTGTTGAAGGTTGGTTATGGCGTGTATACCAAAGCACGGCGGAAC
GGTATTACAGGCAAGGTAATGCCAGCGGCTCCCGGAGGCTCTTCAGCGGTGATTGTCGAA
ACGCTGGAACGCCTGAAAGTACGCTATCGTTTTGCTGGCGCAACGCAGGCATACAATAGC
GGTACTTCTACGCAGATCCCAGCTTCACCCGAGATAAAAACCCCCCGGCGTTTTAAACGC
GTATTATCTGTAGGGAACAGCAGATTAAATGGATGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| AT6033 | Shewanella sp. ANA-3 |
45.161 |
91.176 |
0.427 |