TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Antitoxin (Protein)
| Predicted family | AAA-ATPase (AT10046) | Predicted domain | - |
| Locus tag | orf3875 | Length | 245 a.a. |
| Coordinates | 4123764..4124501 (+) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf3865 | 4119076..4119864 | + | 789 | ORF3865 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3866 | 4119902..4120579 | - | 678 | ORF3866 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3867 | 4120537..4121262 | - | 726 | ORF3867 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3868 | 4121881..4122651 | + | 771 | ORF3868 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3869 | 4122642..4123115 | + | 474 | ORF3869 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3870 | 4123222..4123761 | + | 540 | ORF3870 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3871 | 4123764..4124501 | + | 738 | ORF3871 | Predicted ORF by PRODIGAL Version 1.20 | Antitoxin |
| orf3872 | 4124550..4125044 | + | 495 | ORF3872 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3873 | 4125298..4127310 | + | 2013 | ORF3873 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3874 | 4127414..4128622 | + | 1209 | ORF3874 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3875 | 4128632..4128901 | - | 270 | ORF3875 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Antitoxin
No domain identified.
Sequences
Orphan Antitoxin
Download Length: Molecular weight: 27935.09 Da Isoelectric Point: 9.3705
>ORF3871 Orphan_TA_96 Antitoxin
MKNVGDLMQRLQKMMPAHIKPAFKTGEELLAWQKEQGAIRSAALERENRAMKMQRTFNRS
GIRPLHQNCSFENYRVECEGQMNALSKARQYVEEFDGNIASFIFSGKPGTGKNHLAAAIC
NELLLRGKSVLIITVADIMSAMKDTFRNSGTSEEQLLNDLSNVDLLVIDEIGVQTESKYE
KVIINQIVDRRSSSKRPTGMLTNSNMEEMTKLLGERVMDRMRLGNSLWVIFNWDSYRSRV
TGKEY
MKNVGDLMQRLQKMMPAHIKPAFKTGEELLAWQKEQGAIRSAALERENRAMKMQRTFNRS
GIRPLHQNCSFENYRVECEGQMNALSKARQYVEEFDGNIASFIFSGKPGTGKNHLAAAIC
NELLLRGKSVLIITVADIMSAMKDTFRNSGTSEEQLLNDLSNVDLLVIDEIGVQTESKYE
KVIINQIVDRRSSSKRPTGMLTNSNMEEMTKLLGERVMDRMRLGNSLWVIFNWDSYRSRV
TGKEY
Download Length: 738 bp
>ORF3871 Orphan_TA_96 Antitoxin
ATGAAAAACGTTGGCGACCTGATGCAACGCCTGCAAAAAATGATGCCTGCCCATATCAAA
CCTGCATTCAAAACGGGTGAAGAGCTACTGGCCTGGCAGAAAGAACAAGGAGCGATCCGC
TCCGCCGCTCTCGAACGTGAAAATCGGGCGATGAAAATGCAGCGCACCTTTAACCGCTCC
GGTATTCGGCCACTGCATCAGAACTGCTCCTTTGAGAACTATCGCGTTGAGTGTGAAGGG
CAGATGAATGCGTTAAGCAAAGCGCGCCAGTACGTCGAAGAGTTTGACGGCAACATCGCC
AGCTTCATCTTTTCTGGTAAGCCAGGAACCGGCAAAAACCATCTGGCGGCGGCAATCTGC
AACGAGCTGCTGCTACGCGGTAAATCCGTATTGATCATCACCGTGGCCGATATTATGTCG
GCGATGAAAGATACCTTCAGGAATAGCGGTACCAGTGAAGAACAACTGCTTAACGATCTG
AGCAACGTTGATCTGCTGGTGATCGATGAGATCGGCGTGCAGACCGAATCGAAATACGAA
AAAGTGATCATCAACCAGATCGTCGATCGCCGCTCTTCTTCCAAACGCCCAACCGGGATG
CTGACCAACAGTAATATGGAAGAGATGACCAAGTTGCTGGGCGAACGCGTGATGGACCGT
ATGCGCCTGGGTAACAGTTTGTGGGTGATCTTCAACTGGGATAGCTACCGTAGCCGGGTA
ACAGGTAAAGAGTATTAA
ATGAAAAACGTTGGCGACCTGATGCAACGCCTGCAAAAAATGATGCCTGCCCATATCAAA
CCTGCATTCAAAACGGGTGAAGAGCTACTGGCCTGGCAGAAAGAACAAGGAGCGATCCGC
TCCGCCGCTCTCGAACGTGAAAATCGGGCGATGAAAATGCAGCGCACCTTTAACCGCTCC
GGTATTCGGCCACTGCATCAGAACTGCTCCTTTGAGAACTATCGCGTTGAGTGTGAAGGG
CAGATGAATGCGTTAAGCAAAGCGCGCCAGTACGTCGAAGAGTTTGACGGCAACATCGCC
AGCTTCATCTTTTCTGGTAAGCCAGGAACCGGCAAAAACCATCTGGCGGCGGCAATCTGC
AACGAGCTGCTGCTACGCGGTAAATCCGTATTGATCATCACCGTGGCCGATATTATGTCG
GCGATGAAAGATACCTTCAGGAATAGCGGTACCAGTGAAGAACAACTGCTTAACGATCTG
AGCAACGTTGATCTGCTGGTGATCGATGAGATCGGCGTGCAGACCGAATCGAAATACGAA
AAAGTGATCATCAACCAGATCGTCGATCGCCGCTCTTCTTCCAAACGCCCAACCGGGATG
CTGACCAACAGTAATATGGAAGAGATGACCAAGTTGCTGGGCGAACGCGTGATGGACCGT
ATGCGCCTGGGTAACAGTTTGTGGGTGATCTTCAACTGGGATAGCTACCGTAGCCGGGTA
ACAGGTAAAGAGTATTAA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| AT10046 | Mycoplasma mycoides subsp. capri str. GM12 |
38.636 |
12.465 |
0.069 |