TAfinder detailed results

Overview

Job ID wrVbGpMxFf
Sequence name NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome
Predicted type II

Orphan Toxin (Protein)


Predicted family YjjJ (T10195) Predicted domain -
Locus tag orf3852 Length 49 a.a.
Coordinates 4102994..4103143 (+)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
orf3844 4098769..4100151 - 1383 ORF3844 Predicted ORF by PRODIGAL Version 1.20 -
orf3845 4100200..4101168 - 969 ORF3845 Predicted ORF by PRODIGAL Version 1.20 -
orf3846 4101274..4101918 + 645 ORF3846 Predicted ORF by PRODIGAL Version 1.20 -
orf3847 4101946..4102962 + 1017 ORF3847 Predicted ORF by PRODIGAL Version 1.20 -
orf3848 4102994..4103143 + 150 ORF3848 Predicted ORF by PRODIGAL Version 1.20 Toxin
orf3849 4103418..4104137 - 720 ORF3849 Predicted ORF by PRODIGAL Version 1.20 -
orf3850 4104217..4105440 - 1224 ORF3850 Predicted ORF by PRODIGAL Version 1.20 -
orf3851 4105492..4106814 - 1323 ORF3851 Predicted ORF by PRODIGAL Version 1.20 -
orf3852 4106941..4107720 - 780 ORF3852 Predicted ORF by PRODIGAL Version 1.20 -

Domains

The domains were predicted by HMMER and were sorted by score.

Orphan Toxin


No domain identified.



Sequences

Orphan Toxin        


Download         Length:         Molecular weight: 5662.76 Da        Isoelectric Point: 10.4751

>ORF3848 Orphan_TA_94 Toxin
MIDLENQEREIINIMLSQRISWLAAVRIRHKLSLAEVSKMLGISINSLK

Download         Length: 150 bp

>ORF3848 Orphan_TA_94 Toxin
ATGATCGATCTGGAAAACCAGGAGCGGGAGATTATCAATATAATGTTAAGCCAGCGTATT
TCCTGGCTAGCCGCCGTGCGTATCAGGCATAAATTATCGCTTGCTGAAGTAAGTAAAATG
TTAGGTATCTCGATTAATTCTCTAAAATAG

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
T10195 Escherichia coli strain BL21 (TaKaRa)

95.918

56.322

0.959