TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Antitoxin (Protein)
| Predicted family | panA (AT10015) | Predicted domain | - |
| Locus tag | orf3781 | Length | 271 a.a. |
| Coordinates | 4023153..4023968 (-) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf3776 | 4019459..4022365 | + | 2907 | ORF3776 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3777 | 4022377..4023036 | + | 660 | ORF3777 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3778 | 4023153..4023968 | - | 816 | ORF3778 | Predicted ORF by PRODIGAL Version 1.20 | Antitoxin |
| orf3779 | 4024223..4026577 | + | 2355 | ORF3779 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3780 | 4026630..4027916 | + | 1287 | ORF3780 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3781 | 4027916..4028905 | + | 990 | ORF3781 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Antitoxin
No domain identified.
Sequences
Orphan Antitoxin
Download Length: Molecular weight: 30565.34 Da Isoelectric Point: 10.3140
>ORF3778 Orphan_TA_92 Antitoxin
MQYWGKIIGVAVALLMGGGFWGVVLGLLIGHMFDKARSRKMAWFANQRERQALFFATTFE
VMGHLTKSKGRVTEADIHIASQLMDRMNLHGASRTAAQNAFRVGKSDNYPLREKMRQFRS
VCFGRFDLIRMFLEIQIQAAFADGSLHPNERAVLYVIAEELGISRAQFDQFLRMMQGGAQ
FGGGYQQQSGGGNWQQAQRGPTLEDACNVLGVKPTDDATTIKRAYRKLMSEHHPDKLVAK
GLPPEMMEMAKQKAQEIQQAYELIKQQKGFK
MQYWGKIIGVAVALLMGGGFWGVVLGLLIGHMFDKARSRKMAWFANQRERQALFFATTFE
VMGHLTKSKGRVTEADIHIASQLMDRMNLHGASRTAAQNAFRVGKSDNYPLREKMRQFRS
VCFGRFDLIRMFLEIQIQAAFADGSLHPNERAVLYVIAEELGISRAQFDQFLRMMQGGAQ
FGGGYQQQSGGGNWQQAQRGPTLEDACNVLGVKPTDDATTIKRAYRKLMSEHHPDKLVAK
GLPPEMMEMAKQKAQEIQQAYELIKQQKGFK
Download Length: 816 bp
>ORF3778 Orphan_TA_92 Antitoxin
TTATTTAAACCCTTTCTGCTGCTTTATCAGCTCATATGCCTGCTGAATTTCCTGCGCTTT
CTGCTTCGCCATCTCCATCATCTCAGGCGGCAAACCTTTCGCCACCAGCTTATCGGGATG
GTGTTCACTCATCAGCTTACGGTAGGCACGTTTGATGGTGGTCGCATCATCCGTCGGCTT
CACGCCCAGCACATTACAGGCATCTTCCAGCGTCGGGCCACGCTGCGCTTGCTGCCAGTT
ACCACCGCCAGATTGCTGCTGATAACCGCCGCCAAACTGTGCACCGCCCTGCATCATGCG
CAAAAACTGGTCAAACTGGGCGCGGGAGATCCCTAATTCTTCAGCAATGACATACAGCAC
CGCCCGTTCATTCGGGTGCAGTGAACCATCAGCAAACGCCGCCTGAATCTGGATCTCCAG
AAACATACGAATTAAGTCAAAACGACCAAAGCAGACACTGCGAAACTGGCGCATCTTTTC
GCGCAGCGGGTAATTGTCTGATTTTCCCACCCGGAACGCATTTTGCGCCGCAGTACGGGA
AGCGCCATGAAGATTCATTCGGTCCATCAACTGGCTGGCGATATGAATATCAGCCTCCGT
GACGCGACCTTTGGATTTGGTTAAATGCCCCATCACTTCAAAAGTGGTGGCAAAAAACAG
CGCCTGACGCTCACGCTGGTTGGCGAACCACGCCATTTTACGGCTACGGGCTTTATCAAA
CATATGGCCAATTAACAGGCCTAACACTACGCCCCAAAAGCCGCCGCCCATCAGTAAGGC
CACGGCCACGCCAATGATTTTTCCCCAATACTGCAT
TTATTTAAACCCTTTCTGCTGCTTTATCAGCTCATATGCCTGCTGAATTTCCTGCGCTTT
CTGCTTCGCCATCTCCATCATCTCAGGCGGCAAACCTTTCGCCACCAGCTTATCGGGATG
GTGTTCACTCATCAGCTTACGGTAGGCACGTTTGATGGTGGTCGCATCATCCGTCGGCTT
CACGCCCAGCACATTACAGGCATCTTCCAGCGTCGGGCCACGCTGCGCTTGCTGCCAGTT
ACCACCGCCAGATTGCTGCTGATAACCGCCGCCAAACTGTGCACCGCCCTGCATCATGCG
CAAAAACTGGTCAAACTGGGCGCGGGAGATCCCTAATTCTTCAGCAATGACATACAGCAC
CGCCCGTTCATTCGGGTGCAGTGAACCATCAGCAAACGCCGCCTGAATCTGGATCTCCAG
AAACATACGAATTAAGTCAAAACGACCAAAGCAGACACTGCGAAACTGGCGCATCTTTTC
GCGCAGCGGGTAATTGTCTGATTTTCCCACCCGGAACGCATTTTGCGCCGCAGTACGGGA
AGCGCCATGAAGATTCATTCGGTCCATCAACTGGCTGGCGATATGAATATCAGCCTCCGT
GACGCGACCTTTGGATTTGGTTAAATGCCCCATCACTTCAAAAGTGGTGGCAAAAAACAG
CGCCTGACGCTCACGCTGGTTGGCGAACCACGCCATTTTACGGCTACGGGCTTTATCAAA
CATATGGCCAATTAACAGGCCTAACACTACGCCCCAAAAGCCGCCGCCCATCAGTAAGGC
CACGGCCACGCCAATGATTTTTCCCCAATACTGCAT
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| AT10015 | Corynebacterium doosanense CAU 212 = DSM 45436 strain CAU 212(T) |
31.081 |
39.362 |
0.085 |