TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Antitoxin (Protein)
| Predicted family | vapB (AT131) | Predicted domain | - |
| Locus tag | orf3758 | Length | 152 a.a. |
| Coordinates | 3992759..3993217 (-) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf3751 | 3988198..3989685 | - | 1488 | ORF3751 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3752 | 3989672..3991438 | - | 1767 | ORF3752 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3753 | 3991454..3991819 | - | 366 | ORF3753 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3754 | 3991816..3992757 | - | 942 | ORF3754 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3755 | 3992759..3993217 | - | 459 | ORF3755 | Predicted ORF by PRODIGAL Version 1.20 | Antitoxin |
| orf3756 | 3993819..3994823 | - | 1005 | ORF3756 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3757 | 3995003..3995494 | - | 492 | ORF3757 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3758 | 3995497..3997221 | - | 1725 | ORF3758 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Antitoxin
No domain identified.
Sequences
Orphan Antitoxin
Download Length: Molecular weight: 17359.99 Da Isoelectric Point: 5.5957
>ORF3755 Orphan_TA_91 Antitoxin
MFRGATLVNLDSKGRLSVPTRYREQLLENAAGQMVCTIDIHHPCLLLYPLPEWEIIEQKL
SRLSSMNPVERRVQRLLLGHASECQMDGAGRLLIAPVLRQHAGLTKEVMLVGQFNKFELW
DETTWHQQVKEDIDAEQLATGDLSERLQDLSL
MFRGATLVNLDSKGRLSVPTRYREQLLENAAGQMVCTIDIHHPCLLLYPLPEWEIIEQKL
SRLSSMNPVERRVQRLLLGHASECQMDGAGRLLIAPVLRQHAGLTKEVMLVGQFNKFELW
DETTWHQQVKEDIDAEQLATGDLSERLQDLSL
Download Length: 459 bp
>ORF3755 Orphan_TA_91 Antitoxin
TTATAGAGACAAGTCCTGCAGTCGCTCCGATAAGTCTCCGGTAGCCAACTGCTCTGCGTC
GATATCTTCCTTGACCTGTTGATGCCAGGTTGTTTCATCCCACAGCTCAAACTTGTTGAA
CTGTCCAACCAGCATCACTTCTTTTGTCAGCCCGGCATGTTGCCGCAGTACTGGCGCGAT
TAACAATCGACCTGCGCCATCCATCTGACATTCGCTGGCATGACCTAACAGTAGGCGCTG
CACACGGCGCTCAACCGGGTTCATGCTCGACAGACGCGATAATTTTTGCTCGATAATTTC
CCATTCAGGCAGGGGGTAAAGCAGCAGGCACGGGTGATGAATGTCAATGGTGCAAACCAT
TTGACCGGCAGCGTTCTCAAGCAGCTGTTCCCGGTAACGGGTAGGCACTGATAAGCGCCC
TTTGCTGTCGAGATTGACTAACGTTGCTCCCCGGAACAT
TTATAGAGACAAGTCCTGCAGTCGCTCCGATAAGTCTCCGGTAGCCAACTGCTCTGCGTC
GATATCTTCCTTGACCTGTTGATGCCAGGTTGTTTCATCCCACAGCTCAAACTTGTTGAA
CTGTCCAACCAGCATCACTTCTTTTGTCAGCCCGGCATGTTGCCGCAGTACTGGCGCGAT
TAACAATCGACCTGCGCCATCCATCTGACATTCGCTGGCATGACCTAACAGTAGGCGCTG
CACACGGCGCTCAACCGGGTTCATGCTCGACAGACGCGATAATTTTTGCTCGATAATTTC
CCATTCAGGCAGGGGGTAAAGCAGCAGGCACGGGTGATGAATGTCAATGGTGCAAACCAT
TTGACCGGCAGCGTTCTCAAGCAGCTGTTCCCGGTAACGGGTAGGCACTGATAAGCGCCC
TTTGCTGTCGAGATTGACTAACGTTGCTCCCCGGAACAT
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| AT131 | Mycobacterium tuberculosis H37Rv |
33.333 |
55.882 |
0.125 |