TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Antitoxin (Protein)
| Predicted family | vapB (AT6245) | Predicted domain | PF00440 (TetR_N) |
| Locus tag | orf3698 | Length | 197 a.a. |
| Coordinates | 3924203..3924796 (+) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf3685 | 3919661..3920230 | + | 570 | ORF3685 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3686 | 3920242..3920847 | + | 606 | ORF3686 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3687 | 3920874..3921470 | + | 597 | ORF3687 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3688 | 3921520..3922377 | + | 858 | ORF3688 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3689 | 3922481..3923689 | + | 1209 | ORF3689 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3690 | 3923699..3924115 | - | 417 | ORF3690 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3691 | 3924203..3924796 | + | 594 | ORF3691 | Predicted ORF by PRODIGAL Version 1.20 | Antitoxin |
| orf3692 | 3924909..3925589 | - | 681 | ORF3692 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3693 | 3925753..3926961 | + | 1209 | ORF3693 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3694 | 3926940..3927452 | - | 513 | ORF3694 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3695 | 3927534..3928157 | + | 624 | ORF3695 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3696 | 3928135..3928758 | - | 624 | ORF3696 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3697 | 3928829..3929215 | - | 387 | ORF3697 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3698 | 3929208..3929528 | - | 321 | ORF3698 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Antitoxin
No domain identified.
Sequences
Orphan Antitoxin
Download Length: Molecular weight: 22746.29 Da Isoelectric Point: 8.6633
>ORF3691 Orphan_TA_90 Antitoxin
MENKNHQQENFKSTYQSLVNSARILFVEKGYQAVSIDEISGKALVTKGAFYHHFKNKKQL
LSACYKQQLIMIDAYITTKTDLTNGWSALESIFEHYLDYIIDNNKNLIPIQEVMPIIGWN
ELEKISLEYITGKVNAIVSKLIQENQLKAYDDDVLKNLLNGWFMHIAIHAKNLKELADKK
GQFIAIYRGFLLSLKDK
MENKNHQQENFKSTYQSLVNSARILFVEKGYQAVSIDEISGKALVTKGAFYHHFKNKKQL
LSACYKQQLIMIDAYITTKTDLTNGWSALESIFEHYLDYIIDNNKNLIPIQEVMPIIGWN
ELEKISLEYITGKVNAIVSKLIQENQLKAYDDDVLKNLLNGWFMHIAIHAKNLKELADKK
GQFIAIYRGFLLSLKDK
Download Length: 594 bp
>ORF3691 Orphan_TA_90 Antitoxin
ATGGAAAATAAAAATCATCAACAAGAAAATTTTAAGAGTACCTATCAATCACTGGTTAAC
TCAGCACGAATATTGTTTGTTGAAAAAGGCTATCAAGCTGTTTCAATAGATGAGATCTCG
GGAAAAGCGTTGGTGACCAAAGGTGCCTTTTATCATCACTTTAAAAATAAAAAACAATTA
CTCAGTGCCTGTTATAAGCAGCAATTAATTATGATTGATGCCTACATCACAACAAAAACT
GATTTAACAAATGGTTGGTCTGCCTTAGAAAGTATATTTGAACATTATCTTGATTATATT
ATTGATAATAATAAAAACCTTATCCCTATCCAAGAAGTGATGCCTATCATTGGTTGGAAT
GAACTTGAAAAAATTAGCCTTGAATACATTACTGGTAAGGTAAACGCCATTGTCAGCAAA
TTGATCCAAGAGAACCAACTTAAAGCTTATGATGATGATGTGCTTAAAAACTTACTCAAT
GGCTGGTTTATGCATATCGCAATACATGCGAAAAACCTAAAAGAGCTTGCCGATAAAAAA
GGCCAATTTATTGCTATTTACCGCGGCTTTTTATTGAGCTTGAAAGATAAATAA
ATGGAAAATAAAAATCATCAACAAGAAAATTTTAAGAGTACCTATCAATCACTGGTTAAC
TCAGCACGAATATTGTTTGTTGAAAAAGGCTATCAAGCTGTTTCAATAGATGAGATCTCG
GGAAAAGCGTTGGTGACCAAAGGTGCCTTTTATCATCACTTTAAAAATAAAAAACAATTA
CTCAGTGCCTGTTATAAGCAGCAATTAATTATGATTGATGCCTACATCACAACAAAAACT
GATTTAACAAATGGTTGGTCTGCCTTAGAAAGTATATTTGAACATTATCTTGATTATATT
ATTGATAATAATAAAAACCTTATCCCTATCCAAGAAGTGATGCCTATCATTGGTTGGAAT
GAACTTGAAAAAATTAGCCTTGAATACATTACTGGTAAGGTAAACGCCATTGTCAGCAAA
TTGATCCAAGAGAACCAACTTAAAGCTTATGATGATGATGTGCTTAAAAACTTACTCAAT
GGCTGGTTTATGCATATCGCAATACATGCGAAAAACCTAAAAGAGCTTGCCGATAAAAAA
GGCCAATTTATTGCTATTTACCGCGGCTTTTTATTGAGCTTGAAAGATAAATAA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| AT6245 | Mycobacterium tuberculosis H37Rv |
32.727 |
13.547 |
0.091 |