TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Toxin (Protein)
| Predicted family | doc (T10179) | Predicted domain | - |
| Locus tag | orf3595 | Length | 166 a.a. |
| Coordinates | 3811337..3811837 (+) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf3589 | 3807770..3809911 | - | 2142 | ORF3589 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3590 | 3810121..3810639 | - | 519 | ORF3590 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3591 | 3811337..3811837 | + | 501 | ORF3591 | Predicted ORF by PRODIGAL Version 1.20 | Toxin |
| orf3592 | 3811872..3812096 | + | 225 | ORF3592 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3593 | 3812147..3813622 | + | 1476 | ORF3593 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3594 | 3813629..3814042 | + | 414 | ORF3594 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3595 | 3814046..3815896 | + | 1851 | ORF3595 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Toxin
No domain identified.
Sequences
Orphan Toxin
Download Length: Molecular weight: 18036.41 Da Isoelectric Point: 4.5248
>ORF3591 Orphan_TA_88 Toxin
MSKKFEGSVAPRERINISYVPKTDGQTAEVELPLNMLVVGDTGNTQETSSLDERQAVSVN
KHNFGAVMAEAAIGLNFTVPATLKGSTTDDELNVALNIKSLDDFSPDSVARQVPEVNKLL
ELREALTALKGPMGNLPAFRTQLQALLENEESREQLLKEIGLVSNK
MSKKFEGSVAPRERINISYVPKTDGQTAEVELPLNMLVVGDTGNTQETSSLDERQAVSVN
KHNFGAVMAEAAIGLNFTVPATLKGSTTDDELNVALNIKSLDDFSPDSVARQVPEVNKLL
ELREALTALKGPMGNLPAFRTQLQALLENEESREQLLKEIGLVSNK
Download Length: 501 bp
>ORF3591 Orphan_TA_88 Toxin
ATGAGCAAAAAATTTGAAGGCAGCGTCGCGCCTCGCGAGCGTATTAATATATCGTATGTC
CCAAAAACAGATGGCCAGACGGCTGAAGTGGAACTTCCGCTTAACATGCTCGTTGTCGGC
GATACCGGAAATACGCAGGAAACATCCTCACTGGATGAACGTCAGGCAGTTTCCGTTAAC
AAGCACAATTTCGGTGCAGTGATGGCTGAAGCAGCCATTGGCCTCAATTTTACTGTCCCC
GCCACCCTGAAGGGAAGCACAACAGACGATGAACTGAATGTGGCGCTGAATATCAAATCA
CTGGATGATTTTTCACCAGATAGCGTGGCCCGGCAGGTTCCGGAAGTGAATAAATTGCTG
GAACTGCGTGAAGCACTGACTGCACTGAAGGGGCCGATGGGTAACCTTCCGGCATTCCGT
ACCCAGCTCCAGGCATTGCTGGAAAATGAAGAGTCCCGCGAGCAGTTGCTCAAAGAAATC
GGTCTGGTGAGCAATAAATAA
ATGAGCAAAAAATTTGAAGGCAGCGTCGCGCCTCGCGAGCGTATTAATATATCGTATGTC
CCAAAAACAGATGGCCAGACGGCTGAAGTGGAACTTCCGCTTAACATGCTCGTTGTCGGC
GATACCGGAAATACGCAGGAAACATCCTCACTGGATGAACGTCAGGCAGTTTCCGTTAAC
AAGCACAATTTCGGTGCAGTGATGGCTGAAGCAGCCATTGGCCTCAATTTTACTGTCCCC
GCCACCCTGAAGGGAAGCACAACAGACGATGAACTGAATGTGGCGCTGAATATCAAATCA
CTGGATGATTTTTCACCAGATAGCGTGGCCCGGCAGGTTCCGGAAGTGAATAAATTGCTG
GAACTGCGTGAAGCACTGACTGCACTGAAGGGGCCGATGGGTAACCTTCCGGCATTCCGT
ACCCAGCTCCAGGCATTGCTGGAAAATGAAGAGTCCCGCGAGCAGTTGCTCAAAGAAATC
GGTCTGGTGAGCAATAAATAA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| T10179 | Staphylococcus epidermidis isolate BPH0662 |
32.653 |
37.405 |
0.096 |