TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Toxin (Protein)
| Predicted family | sam-T (T10178) | Predicted domain | - |
| Locus tag | orf3584 | Length | 192 a.a. |
| Coordinates | 3796497..3797075 (-) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf3574 | 3792473..3792751 | + | 279 | ORF3574 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3575 | 3792744..3793100 | + | 357 | ORF3575 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3576 | 3793157..3793930 | - | 774 | ORF3576 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3577 | 3794116..3794376 | + | 261 | ORF3577 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3578 | 3794379..3794657 | + | 279 | ORF3578 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3579 | 3794813..3795553 | + | 741 | ORF3579 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3580 | 3795524..3796291 | - | 768 | ORF3580 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3581 | 3796497..3797075 | - | 579 | ORF3581 | Predicted ORF by PRODIGAL Version 1.20 | Toxin |
| orf3582 | 3797315..3799759 | + | 2445 | ORF3582 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3583 | 3799802..3800248 | - | 447 | ORF3583 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3584 | 3800429..3801199 | + | 771 | ORF3584 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Toxin
No domain identified.
Sequences
Orphan Toxin
Download Length: Molecular weight: 20814.75 Da Isoelectric Point: 6.3788
>ORF3581 Orphan_TA_87 Toxin
MYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAGGKVLSCGNGGSHCDAM
HFAEELTGRYRENRPGYPAIAISDVSHISCVGNDFGFNDIFSRYVEAVGREGDVLLGIST
SGNSANVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEIRVPHFGYADRIQEIHIKVIH
ILIQLIEKEMVK
MYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAGGKVLSCGNGGSHCDAM
HFAEELTGRYRENRPGYPAIAISDVSHISCVGNDFGFNDIFSRYVEAVGREGDVLLGIST
SGNSANVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEIRVPHFGYADRIQEIHIKVIH
ILIQLIEKEMVK
Download Length: 579 bp
>ORF3581 Orphan_TA_87 Toxin
TTACTTAACCATCTCTTTTTCAATTAACTGGATCAGGATATGGATCACTTTAATGTGAAT
CTCCTGAATGCGGTCGGCATAACCAAAGTGCGGAACGCGAATTTCGATATCCGCCGTGCC
AGCCATTTTACCGCCGTCTTTACCGGTCAGGGTGATCACTTTCATCCCCTTCTCACGCGC
CGCTGCGATCGCTTTGATCACGTTTGCAGAGTTACCGGAGGTGGAGATCCCCAGCAGTAC
ATCGCCTTCGCGACCTACCGCTTCAACGTAGCGGGAGAAAATATCATTGAAACCGAAATC
ATTACCGACGCAGGAAATATGACTAACGTCAGAAATAGCAATCGCCGGGTAGCCCGGACG
GTTTTCACGGTAGCGACCGGTCAACTCTTCGGCAAAGTGCATAGCGTCGCAATGGGAACC
GCCGTTGCCGCAGGAAAGCACTTTGCCACCGGCTTTAAAGCTGTCTGCTAACAGGACCGC
CGCGCGCTGAATGGCGTGAATATTGGCGTCATCTTTTAAAAAGTTAGCCAGCGTTTCCGC
CGCTTCGTTCAGTTCGTTACGAATAAGATCCTGGTACAT
TTACTTAACCATCTCTTTTTCAATTAACTGGATCAGGATATGGATCACTTTAATGTGAAT
CTCCTGAATGCGGTCGGCATAACCAAAGTGCGGAACGCGAATTTCGATATCCGCCGTGCC
AGCCATTTTACCGCCGTCTTTACCGGTCAGGGTGATCACTTTCATCCCCTTCTCACGCGC
CGCTGCGATCGCTTTGATCACGTTTGCAGAGTTACCGGAGGTGGAGATCCCCAGCAGTAC
ATCGCCTTCGCGACCTACCGCTTCAACGTAGCGGGAGAAAATATCATTGAAACCGAAATC
ATTACCGACGCAGGAAATATGACTAACGTCAGAAATAGCAATCGCCGGGTAGCCCGGACG
GTTTTCACGGTAGCGACCGGTCAACTCTTCGGCAAAGTGCATAGCGTCGCAATGGGAACC
GCCGTTGCCGCAGGAAAGCACTTTGCCACCGGCTTTAAAGCTGTCTGCTAACAGGACCGC
CGCGCGCTGAATGGCGTGAATATTGGCGTCATCTTTTAAAAAGTTAGCCAGCGTTTCCGC
CGCTTCGTTCAGTTCGTTACGAATAAGATCCTGGTACAT
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| T10178 | Staphylococcus epidermidis isolate BPH0662 |
30.435 |
15.753 |
0.073 |