TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Antitoxin (Protein)
| Predicted family | TsdA (AT10117) | Predicted domain | - |
| Locus tag | orf3445 | Length | 91 a.a. |
| Coordinates | 3646657..3646932 (+) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf3434 | 3641922..3642479 | + | 558 | ORF3434 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3435 | 3642495..3642593 | + | 99 | ORF3435 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3436 | 3642603..3643799 | + | 1197 | ORF3436 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3437 | 3643959..3644864 | - | 906 | ORF3437 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3438 | 3644822..3645187 | - | 366 | ORF3438 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3439 | 3645251..3645694 | + | 444 | ORF3439 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3440 | 3645696..3646469 | + | 774 | ORF3440 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3441 | 3646657..3646932 | + | 276 | ORF3441 | Predicted ORF by PRODIGAL Version 1.20 | Antitoxin |
| orf3442 | 3646967..3648076 | + | 1110 | ORF3442 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3443 | 3648170..3649003 | + | 834 | ORF3443 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3444 | 3649227..3649766 | - | 540 | ORF3444 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3445 | 3649868..3651079 | - | 1212 | ORF3445 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Antitoxin
No domain identified.
Sequences
Orphan Antitoxin
Download Length: Molecular weight: 10317.72 Da Isoelectric Point: 5.8893
>ORF3441 Orphan_TA_81 Antitoxin
MPSTPEEKKKVLTRVRRIRGQIDALERSLEGDAECRAILQQIAAVRGAANGLMAEVLESH
IRETFDRNDCYSREVSQSVDDTIELVRAYLK
MPSTPEEKKKVLTRVRRIRGQIDALERSLEGDAECRAILQQIAAVRGAANGLMAEVLESH
IRETFDRNDCYSREVSQSVDDTIELVRAYLK
Download Length: 276 bp
>ORF3441 Orphan_TA_81 Antitoxin
ATGCCCAGTACTCCGGAAGAGAAGAAAAAGGTCCTTACTCGAGTTCGTCGTATTCGGGGG
CAGATTGATGCTCTGGAACGGTCGCTGGAGGGTGATGCCGAATGCCGTGCCATACTCCAA
CAGATCGCTGCCGTTCGGGGCGCGGCTAATGGGCTGATGGCAGAAGTGCTTGAAAGCCAT
ATCCGGGAAACGTTTGACCGAAATGACTGCTACAGCCGCGAAGTCAGCCAATCCGTTGAC
GACACTATTGAACTGGTTCGTGCCTATCTTAAATAG
ATGCCCAGTACTCCGGAAGAGAAGAAAAAGGTCCTTACTCGAGTTCGTCGTATTCGGGGG
CAGATTGATGCTCTGGAACGGTCGCTGGAGGGTGATGCCGAATGCCGTGCCATACTCCAA
CAGATCGCTGCCGTTCGGGGCGCGGCTAATGGGCTGATGGCAGAAGTGCTTGAAAGCCAT
ATCCGGGAAACGTTTGACCGAAATGACTGCTACAGCCGCGAAGTCAGCCAATCCGTTGAC
GACACTATTGAACTGGTTCGTGCCTATCTTAAATAG
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| AT10117 | Staphylococcus aureus subsp. aureus N315 |
34.286 |
72.165 |
0.264 |