TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Toxin (Protein)
| Predicted family | mazF (T6252) | Predicted domain | - |
| Locus tag | orf3184 | Length | 155 a.a. |
| Coordinates | 3363006..3363473 (+) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf3176 | 3359535..3360116 | + | 582 | ORF3176 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3177 | 3360116..3361147 | + | 1032 | ORF3177 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3178 | 3361149..3361790 | + | 642 | ORF3178 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3179 | 3361814..3362425 | + | 612 | ORF3179 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3180 | 3362685..3363002 | + | 318 | ORF3180 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3181 | 3363006..3363473 | + | 468 | ORF3181 | Predicted ORF by PRODIGAL Version 1.20 | Toxin |
| orf3182 | 3363504..3365405 | + | 1902 | ORF3182 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3183 | 3365408..3366520 | + | 1113 | ORF3183 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf3184 | 3366531..3367619 | + | 1089 | ORF3184 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Toxin
No domain identified.
Sequences
Orphan Toxin
Download Length: Molecular weight: 17309.05 Da Isoelectric Point: 8.9138
>ORF3181 Orphan_TA_74 Toxin
VKLQLVAVGTKMPDWVQTGFTEYLRRFPKDMPFELIEIPAGKRGKNADIKRILDKEGEQM
LAAAGKNRIVTLDIPGKPWDTPQLAAELERWKLDGRDVSLLIGGPEGLSPACKAAAEQSW
SLSALTLPHPLVRVLVAESLYRAWSITTNHPYHRE
VKLQLVAVGTKMPDWVQTGFTEYLRRFPKDMPFELIEIPAGKRGKNADIKRILDKEGEQM
LAAAGKNRIVTLDIPGKPWDTPQLAAELERWKLDGRDVSLLIGGPEGLSPACKAAAEQSW
SLSALTLPHPLVRVLVAESLYRAWSITTNHPYHRE
Download Length: 468 bp
>ORF3181 Orphan_TA_74 Toxin
GTGAAGCTGCAACTTGTCGCCGTGGGAACGAAAATGCCGGACTGGGTACAAACCGGTTTT
ACCGAGTACCTGCGTCGTTTTCCGAAAGATATGCCCTTCGAGCTGATTGAAATTCCGGCC
GGAAAACGCGGCAAGAATGCGGACATCAAGCGCATACTCGACAAAGAGGGTGAGCAGATG
TTGGCGGCCGCAGGCAAAAACCGCATTGTCACCCTCGATATTCCAGGCAAGCCCTGGGAT
ACACCGCAGTTAGCCGCTGAGCTGGAACGCTGGAAGCTGGATGGTCGCGACGTCAGTCTA
CTGATTGGCGGGCCTGAAGGGTTGTCGCCTGCCTGTAAAGCGGCGGCGGAGCAGAGCTGG
TCGCTGTCGGCGCTTACCCTCCCCCATCCGCTGGTTCGCGTGCTGGTCGCAGAGAGTCTG
TACCGGGCGTGGAGCATCACCACCAACCATCCTTATCACCGTGAGTGA
GTGAAGCTGCAACTTGTCGCCGTGGGAACGAAAATGCCGGACTGGGTACAAACCGGTTTT
ACCGAGTACCTGCGTCGTTTTCCGAAAGATATGCCCTTCGAGCTGATTGAAATTCCGGCC
GGAAAACGCGGCAAGAATGCGGACATCAAGCGCATACTCGACAAAGAGGGTGAGCAGATG
TTGGCGGCCGCAGGCAAAAACCGCATTGTCACCCTCGATATTCCAGGCAAGCCCTGGGAT
ACACCGCAGTTAGCCGCTGAGCTGGAACGCTGGAAGCTGGATGGTCGCGACGTCAGTCTA
CTGATTGGCGGGCCTGAAGGGTTGTCGCCTGCCTGTAAAGCGGCGGCGGAGCAGAGCTGG
TCGCTGTCGGCGCTTACCCTCCCCCATCCGCTGGTTCGCGTGCTGGTCGCAGAGAGTCTG
TACCGGGCGTGGAGCATCACCACCAACCATCCTTATCACCGTGAGTGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| T6252 | Mycobacterium tuberculosis H37Rv |
43.59 |
33.051 |
0.11 |