TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Antitoxin (Protein)
| Predicted family | relB (AT10123) | Predicted domain | - |
| Locus tag | orf524 | Length | 188 a.a. |
| Coordinates | 544639..545205 (-) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf513 | 540409..540900 | - | 492 | ORF513 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf514 | 541018..541305 | - | 288 | ORF514 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf515 | 541328..542761 | - | 1434 | ORF515 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf516 | 542809..543534 | - | 726 | ORF516 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf517 | 543541..544098 | - | 558 | ORF517 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf518 | 544067..544642 | - | 576 | ORF518 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf519 | 544639..545205 | - | 567 | ORF519 | Predicted ORF by PRODIGAL Version 1.20 | Antitoxin |
| orf520 | 545226..546212 | - | 987 | ORF520 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf521 | 546226..547203 | - | 978 | ORF521 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf522 | 547413..548222 | + | 810 | ORF522 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf523 | 548230..549012 | + | 783 | ORF523 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf524 | 549017..549568 | + | 552 | ORF524 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Antitoxin
No domain identified.
Sequences
Orphan Antitoxin
Download Length: Molecular weight: 20015.15 Da Isoelectric Point: 4.7126
>ORF519 Orphan_TA_7 Antitoxin
MSKAGASLATCYGPVSADVMAKAENIRLLILDVDGVLSDGLIYMGNNGEELKAFNVRDGY
GIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQGQSNKLIAFSDLLEKLAIAPENV
AYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCDLLLLAQGKL
DEAKGQSI
MSKAGASLATCYGPVSADVMAKAENIRLLILDVDGVLSDGLIYMGNNGEELKAFNVRDGY
GIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQGQSNKLIAFSDLLEKLAIAPENV
AYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCDLLLLAQGKL
DEAKGQSI
Download Length: 567 bp
>ORF519 Orphan_TA_7 Antitoxin
TCATATCGATTGCCCTTTGGCTTCATCCAGTTTGCCCTGCGCCAGGAGTAATAAGTCGCA
AACTTCGCGCACTGCGCCACGACCGCCAGCAATGCGCGTCACGTAATCGGCGCGCGGGAT
CAACAGTGGATGCGCATCGGCCACGGCGACGCTTAAACCCACTTTTTCCATTACCGGCCA
GTCGATGAGATCATCGCCGACATAAGCCACATTTTCCGGGGCAATCGCCAGTTTTTCCAG
CAAATCGCTAAAGGCGATCAGTTTGTTTGACTGCCCCTGATACAAGTGAGTGATCCCCAA
TGTGGCACAACGATCTTCTACCAGTTTAGCCTTTCGCCCGGTAATGATAGCGACTTCAAT
ATCAGAGGTGAGCGCACAACGAATGCCATAACCGTCACGAACATTGAACGCTTTCAGCTC
TTCGCCGTTATTGCCCATATAAATCAGGCCATCTGACAGTACGCCATCAACGTCGAGGAT
CAGCAGACGAATGTTCTCTGCTTTTGCCATAACGTCGGCGCTGACAGGGCCGTAACAGGT
CGCAAGCGACGCACCTGCTTTGCTCAT
TCATATCGATTGCCCTTTGGCTTCATCCAGTTTGCCCTGCGCCAGGAGTAATAAGTCGCA
AACTTCGCGCACTGCGCCACGACCGCCAGCAATGCGCGTCACGTAATCGGCGCGCGGGAT
CAACAGTGGATGCGCATCGGCCACGGCGACGCTTAAACCCACTTTTTCCATTACCGGCCA
GTCGATGAGATCATCGCCGACATAAGCCACATTTTCCGGGGCAATCGCCAGTTTTTCCAG
CAAATCGCTAAAGGCGATCAGTTTGTTTGACTGCCCCTGATACAAGTGAGTGATCCCCAA
TGTGGCACAACGATCTTCTACCAGTTTAGCCTTTCGCCCGGTAATGATAGCGACTTCAAT
ATCAGAGGTGAGCGCACAACGAATGCCATAACCGTCACGAACATTGAACGCTTTCAGCTC
TTCGCCGTTATTGCCCATATAAATCAGGCCATCTGACAGTACGCCATCAACGTCGAGGAT
CAGCAGACGAATGTTCTCTGCTTTTGCCATAACGTCGGCGCTGACAGGGCCGTAACAGGT
CGCAAGCGACGCACCTGCTTTGCTCAT
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| AT10123 | Paracoccus phage vB_PkoS_Pkon1 |
51.351 |
32.743 |
0.101 |