TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Antitoxin (Protein)
| Predicted family | - (AT611) | Predicted domain | PF08220 (HTH_DeoR) |
| Locus tag | orf2994 | Length | 252 a.a. |
| Coordinates | 3147901..3148659 (+) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf2985 | 3143377..3144504 | + | 1128 | ORF2985 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2986 | 3144504..3145319 | + | 816 | ORF2986 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2987 | 3145411..3145689 | + | 279 | ORF2987 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2988 | 3145730..3146962 | - | 1233 | ORF2988 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2989 | 3147247..3147843 | + | 597 | ORF2989 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2990 | 3147901..3148659 | + | 759 | ORF2990 | Predicted ORF by PRODIGAL Version 1.20 | Antitoxin |
| orf2991 | 3148706..3149908 | - | 1203 | ORF2991 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2992 | 3150155..3150781 | + | 627 | ORF2992 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2993 | 3150778..3151893 | - | 1116 | ORF2993 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2994 | 3152004..3152387 | - | 384 | ORF2994 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Antitoxin
No domain identified.
Sequences
Orphan Antitoxin
Download Length: Molecular weight: 28575.03 Da Isoelectric Point: 7.6637
>ORF2990 Orphan_TA_69 Antitoxin
METRREERIGQLLQELKRSDKLHLKDAAALLGVSEMTIRRDLNNHSAPVVLLGGYIVLEP
RSASHYLLSDQKSRLVEEKRRAAKMAATLVEPDQTLFFDCGTTTPWIIEAIDNEIPFTAV
CYSLNTFLALKEKPHCRAFLCGGEFHASNAIFKPIDFQQTLNNFCPDIAFYSAAGVHVSK
GATCFNLEELPVKHWAMSMAQKHVLVVDHSKFGKVRPARMGDLKRFDIVVSDCCPEDEYV
KYAQTHRIKLMY
METRREERIGQLLQELKRSDKLHLKDAAALLGVSEMTIRRDLNNHSAPVVLLGGYIVLEP
RSASHYLLSDQKSRLVEEKRRAAKMAATLVEPDQTLFFDCGTTTPWIIEAIDNEIPFTAV
CYSLNTFLALKEKPHCRAFLCGGEFHASNAIFKPIDFQQTLNNFCPDIAFYSAAGVHVSK
GATCFNLEELPVKHWAMSMAQKHVLVVDHSKFGKVRPARMGDLKRFDIVVSDCCPEDEYV
KYAQTHRIKLMY
Download Length: 759 bp
>ORF2990 Orphan_TA_69 Antitoxin
ATGGAAACACGTCGCGAAGAGCGTATCGGGCAGCTGCTGCAAGAATTAAAACGCAGCGAT
AAGTTACATCTTAAAGACGCCGCCGCCCTGCTTGGGGTTTCGGAGATGACGATTCGTCGC
GATCTGAACAACCACAGTGCGCCCGTCGTTTTGCTCGGCGGCTATATTGTTCTGGAACCG
CGCAGTGCCAGCCATTACCTGTTAAGCGATCAAAAATCCCGCCTGGTGGAAGAAAAACGC
CGGGCGGCAAAAATGGCTGCGACACTGGTAGAACCCGATCAGACTCTCTTTTTTGACTGT
GGCACCACCACGCCGTGGATTATTGAAGCGATTGATAATGAAATCCCTTTTACCGCCGTT
TGTTATTCGCTAAATACCTTTCTGGCGCTGAAAGAGAAACCCCATTGCCGCGCATTTCTG
TGCGGTGGTGAATTTCACGCCAGCAACGCCATTTTCAAACCCATCGATTTTCAGCAAACG
TTGAATAATTTTTGCCCGGATATCGCTTTTTATTCCGCGGCGGGCGTGCATGTCAGTAAA
GGCGCTACCTGTTTTAATCTTGAAGAGTTGCCGGTAAAACACTGGGCCATGTCGATGGCG
CAAAAGCATGTGCTGGTTGTCGACCACAGTAAATTTGGCAAGGTGCGTCCGGCGCGCATG
GGTGACCTGAAACGCTTTGATATTGTGGTGAGTGATTGTTGCCCGGAAGATGAGTATGTG
AAGTACGCGCAGACGCACCGTATTAAGTTGATGTATTAA
ATGGAAACACGTCGCGAAGAGCGTATCGGGCAGCTGCTGCAAGAATTAAAACGCAGCGAT
AAGTTACATCTTAAAGACGCCGCCGCCCTGCTTGGGGTTTCGGAGATGACGATTCGTCGC
GATCTGAACAACCACAGTGCGCCCGTCGTTTTGCTCGGCGGCTATATTGTTCTGGAACCG
CGCAGTGCCAGCCATTACCTGTTAAGCGATCAAAAATCCCGCCTGGTGGAAGAAAAACGC
CGGGCGGCAAAAATGGCTGCGACACTGGTAGAACCCGATCAGACTCTCTTTTTTGACTGT
GGCACCACCACGCCGTGGATTATTGAAGCGATTGATAATGAAATCCCTTTTACCGCCGTT
TGTTATTCGCTAAATACCTTTCTGGCGCTGAAAGAGAAACCCCATTGCCGCGCATTTCTG
TGCGGTGGTGAATTTCACGCCAGCAACGCCATTTTCAAACCCATCGATTTTCAGCAAACG
TTGAATAATTTTTGCCCGGATATCGCTTTTTATTCCGCGGCGGGCGTGCATGTCAGTAAA
GGCGCTACCTGTTTTAATCTTGAAGAGTTGCCGGTAAAACACTGGGCCATGTCGATGGCG
CAAAAGCATGTGCTGGTTGTCGACCACAGTAAATTTGGCAAGGTGCGTCCGGCGCGCATG
GGTGACCTGAAACGCTTTGATATTGTGGTGAGTGATTGTTGCCCGGAAGATGAGTATGTG
AAGTACGCGCAGACGCACCGTATTAAGTTGATGTATTAA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| AT611 | Staphylococcus aureus subsp. aureus MW2 |
34.375 |
29.907 |
0.044 |