TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Antitoxin (Protein)
| Predicted family | vagC (AT10197) | Predicted domain | - |
| Locus tag | orf2936 | Length | 158 a.a. |
| Coordinates | 3100629..3101105 (-) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf2926 | 3096133..3096978 | - | 846 | ORF2926 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2927 | 3096975..3097928 | - | 954 | ORF2927 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2928 | 3097938..3099071 | - | 1134 | ORF2928 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2929 | 3099166..3100278 | - | 1113 | ORF2929 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2930 | 3100629..3101105 | - | 477 | ORF2930 | Predicted ORF by PRODIGAL Version 1.20 | Antitoxin |
| orf2931 | 3101193..3102095 | - | 903 | ORF2931 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2932 | 3102156..3102878 | - | 723 | ORF2932 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2933 | 3102862..3103149 | - | 288 | ORF2933 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2934 | 3103309..3103566 | + | 258 | ORF2934 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2935 | 3103596..3103973 | - | 378 | ORF2935 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2936 | 3104243..3105928 | + | 1686 | ORF2936 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Antitoxin
No domain identified.
Sequences
Orphan Antitoxin
Download Length: Molecular weight: 17666.10 Da Isoelectric Point: 3.9175
>ORF2930 Orphan_TA_67 Antitoxin
MTSLVVPGLDTLRQWLDDLGMSFFECDNCQALHLPHMQNFDGVFDAKIDLIDNTILFSAM
AEVRPSAVLPLAADLSAINASSLTVKAFLDMQDDNLPKLVVCQSLSVMQGVTYEQFAWFV
RQSEEQISMVILEANAHQLLLPTDDEGQNNVTENYFLH
MTSLVVPGLDTLRQWLDDLGMSFFECDNCQALHLPHMQNFDGVFDAKIDLIDNTILFSAM
AEVRPSAVLPLAADLSAINASSLTVKAFLDMQDDNLPKLVVCQSLSVMQGVTYEQFAWFV
RQSEEQISMVILEANAHQLLLPTDDEGQNNVTENYFLH
Download Length: 477 bp
>ORF2930 Orphan_TA_67 Antitoxin
TCAGTGGAGGAAATAGTTTTCGGTAACGTTGTTTTGCCCTTCATCATCAGTCGGTAACAG
CAGTTGATGGGCATTAGCTTCAAGAATGACCATCGAAATCTGCTCTTCGCTCTGACGCAC
GAACCATGCAAACTGCTCATAGGTTACGCCCTGCATAACGGATAAAGACTGGCAAACCAC
CAGCTTTGGCAGATTATCATCCTGCATATCAAGAAATGCTTTCACGGTCAGCGAACTGGC
ATTGATGGCAGATAAATCCGCCGCCAGCGGCAATACGGCTGAAGGTCGGACTTCCGCCAT
GGCAGAAAACAGGATCGTGTTATCGATCAGATCGATTTTGGCATCAAAGACACCGTCGAA
ATTCTGCATATGGGGCAGATGCAGAGCCTGACAGTTATCACATTCAAAAAAACTCATCCC
CAGGTCATCGAGCCATTGACGCAGCGTATCCAGACCAGGAACGACCAGCGATGTCAT
TCAGTGGAGGAAATAGTTTTCGGTAACGTTGTTTTGCCCTTCATCATCAGTCGGTAACAG
CAGTTGATGGGCATTAGCTTCAAGAATGACCATCGAAATCTGCTCTTCGCTCTGACGCAC
GAACCATGCAAACTGCTCATAGGTTACGCCCTGCATAACGGATAAAGACTGGCAAACCAC
CAGCTTTGGCAGATTATCATCCTGCATATCAAGAAATGCTTTCACGGTCAGCGAACTGGC
ATTGATGGCAGATAAATCCGCCGCCAGCGGCAATACGGCTGAAGGTCGGACTTCCGCCAT
GGCAGAAAACAGGATCGTGTTATCGATCAGATCGATTTTGGCATCAAAGACACCGTCGAA
ATTCTGCATATGGGGCAGATGCAGAGCCTGACAGTTATCACATTCAAAAAAACTCATCCC
CAGGTCATCGAGCCATTGACGCAGCGTATCCAGACCAGGAACGACCAGCGATGTCAT
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| AT10197 | Klebsiella pneumoniae |
32.609 |
60.526 |
0.095 |