TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Toxin (Protein)
| Predicted family | - (T6098) | Predicted domain | - |
| Locus tag | orf2887 | Length | 196 a.a. |
| Coordinates | 3043751..3044341 (-) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf2880 | 3039543..3040400 | + | 858 | ORF2880 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2881 | 3040455..3042737 | + | 2283 | ORF2881 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2882 | 3042929..3043669 | + | 741 | ORF2882 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2883 | 3043751..3044341 | - | 591 | ORF2883 | Predicted ORF by PRODIGAL Version 1.20 | Toxin |
| orf2884 | 3044441..3045349 | + | 909 | ORF2884 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2885 | 3045350..3046780 | - | 1431 | ORF2885 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2886 | 3046990..3048114 | - | 1125 | ORF2886 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2887 | 3048453..3049079 | + | 627 | ORF2887 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Toxin
No domain identified.
Sequences
Orphan Toxin
Download Length: Molecular weight: 23026.11 Da Isoelectric Point: 5.0723
>ORF2883 Orphan_TA_66 Toxin
MQSERIYLVWAHPRHDSLTAHIADAIHQRAMERKIQVTELDLYRRNFNPVMTSEDEPDWK
NMDKRYSPEVHQLYSELLEHDTLVVVFPLWWYSFPAMLKGYIDRVWNNGLAYGDGHKLPF
NKVRWVALVGGDKESFVQMGWEKNISDYLKNMCSYLGIEDADVTFLCNTVVFDGEELHAS
YYQSLLSQVRDMVDAL
MQSERIYLVWAHPRHDSLTAHIADAIHQRAMERKIQVTELDLYRRNFNPVMTSEDEPDWK
NMDKRYSPEVHQLYSELLEHDTLVVVFPLWWYSFPAMLKGYIDRVWNNGLAYGDGHKLPF
NKVRWVALVGGDKESFVQMGWEKNISDYLKNMCSYLGIEDADVTFLCNTVVFDGEELHAS
YYQSLLSQVRDMVDAL
Download Length: 591 bp
>ORF2883 Orphan_TA_66 Toxin
TTATAGTGCATCTACCATATCCCGTACCTGAGATAATAACGACTGATAATAGCTCGCGTG
AAGTTCTTCCCCATCGAATACCACTGTATTACACAAGAAAGTGACATCGGCATCTTCAAT
ACCAAGATAACTGCACATATTTTTTAAATAATCGCTTATATTTTTTTCCCAGCCCATCTG
GACAAATGATTCTTTGTCTCCTCCAACCAGCGCCACCCAACGAACTTTATTGAATGGTAA
TTTGTGCCCATCTCCATAAGCCAGCCCATTATTCCATACTCTGTCAATATATCCTTTTAG
CATTGCCGGGAAGCTGTACCACCAGAGAGGAAAAACCACCACTAACGTGTCATGCTCAAG
CAGCTCTGAATAAAGCTGATGAACCTCTGGAGAATAACGTTTATCCATATTCTTCCAGTC
TGGTTCATCTTCCGACGTCATCACCGGGTTGAAATTACGCCGATATAAATCGAGTTCCGT
CACCTGTATTTTCCGCTCCATTGCCCGCTGATGGATCGCATCAGCAATATGTGCGGTCAA
TGAATCATGACGAGGATGGGCCCATACCAAATAAATACGTTCAGACTGCAT
TTATAGTGCATCTACCATATCCCGTACCTGAGATAATAACGACTGATAATAGCTCGCGTG
AAGTTCTTCCCCATCGAATACCACTGTATTACACAAGAAAGTGACATCGGCATCTTCAAT
ACCAAGATAACTGCACATATTTTTTAAATAATCGCTTATATTTTTTTCCCAGCCCATCTG
GACAAATGATTCTTTGTCTCCTCCAACCAGCGCCACCCAACGAACTTTATTGAATGGTAA
TTTGTGCCCATCTCCATAAGCCAGCCCATTATTCCATACTCTGTCAATATATCCTTTTAG
CATTGCCGGGAAGCTGTACCACCAGAGAGGAAAAACCACCACTAACGTGTCATGCTCAAG
CAGCTCTGAATAAAGCTGATGAACCTCTGGAGAATAACGTTTATCCATATTCTTCCAGTC
TGGTTCATCTTCCGACGTCATCACCGGGTTGAAATTACGCCGATATAAATCGAGTTCCGT
CACCTGTATTTTCCGCTCCATTGCCCGCTGATGGATCGCATCAGCAATATGTGCGGTCAA
TGAATCATGACGAGGATGGGCCCATACCAAATAAATACGTTCAGACTGCAT
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| T6098 | Sinorhizobium meliloti 1021 |
43.75 |
17.391 |
0.071 |