TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Antitoxin (Protein)
| Predicted family | vapB (AT6245) | Predicted domain | PF00440 (TetR_N) |
| Locus tag | orf2778 | Length | 212 a.a. |
| Coordinates | 2919975..2920613 (-) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf2770 | 2915709..2915918 | - | 210 | ORF2770 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2771 | 2915973..2919935 | + | 3963 | ORF2771 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2772 | 2919975..2920613 | - | 639 | ORF2772 | Predicted ORF by PRODIGAL Version 1.20 | Antitoxin |
| orf2773 | 2920901..2921992 | + | 1092 | ORF2773 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2774 | 2921989..2922684 | + | 696 | ORF2774 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2775 | 2922696..2923082 | + | 387 | ORF2775 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2776 | 2923090..2923890 | + | 801 | ORF2776 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2777 | 2923900..2924490 | + | 591 | ORF2777 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2778 | 2924501..2924995 | + | 495 | ORF2778 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Antitoxin
No domain identified.
Sequences
Orphan Antitoxin
Download Length: Molecular weight: 23714.70 Da Isoelectric Point: 9.5412
>ORF2772 Orphan_TA_64 Antitoxin
MTQGAVKTKGKRSRAVSAKKKAILSAALDTFSQFGFHGTRLEQIAELAGVSKTNLLYYFP
SKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKLEVSRDYPQASRLFCMEML
AGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQHLIFMIWASTQHYADFAPQV
EAVTGATLRDEVFFNQTVENVQRIIIEGIRPR
MTQGAVKTKGKRSRAVSAKKKAILSAALDTFSQFGFHGTRLEQIAELAGVSKTNLLYYFP
SKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKLEVSRDYPQASRLFCMEML
AGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQHLIFMIWASTQHYADFAPQV
EAVTGATLRDEVFFNQTVENVQRIIIEGIRPR
Download Length: 639 bp
>ORF2772 Orphan_TA_64 Antitoxin
TTAACGTGGTCGAATCCCCTCAATAATAATCCGCTGCACGTTTTCAACCGTTTGATTGAA
AAATACCTCATCGCGCAACGTCGCGCCTGTCACCGCCTCCACCTGAGGGGCAAAATCGGC
GTAATGTTGAGTGGAAGCCCAAATCATAAAAATCAAATGCTGCGGATCAATCGGCGCGAG
TTTGCCGCTTTTGACCCAACCGGCAATCAGCGCCGATTTCTCATCAATTAATGCCTTCAA
ATCGCCCGTCAGTTCATCCATTAACAGCGGCGCGCCTGCCAGCATCTCCATACAGAACAG
GCGCGAAGCCTGCGGATAATCGCGGGAGACTTCCAGCTTCAGACGGATGTACTCTTTGAT
CGCCGCCAGCGGGGCGAAATCTTCTCGAAACGCTTTTAACGGTGCCAGCCAGATATCGAG
AATCTGCCGCAGCACGGCAATATACAGCGCCTCTTTTGACGGAAAGTAATACAGCAGATT
GGTTTTTGAAACACCCGCCAACTCTGCGATCTGCTCCAGCCTTGTGCCGTGAAAACCGAA
TTGTGAAAAAGTGTCCAGTGCTGCGCTAAGAATCGCTTTTTTCTTCGCGCTTACTGCGCG
CGAACGTTTACCCTTTGTTTTCACTGCGCCTTGCGTCAT
TTAACGTGGTCGAATCCCCTCAATAATAATCCGCTGCACGTTTTCAACCGTTTGATTGAA
AAATACCTCATCGCGCAACGTCGCGCCTGTCACCGCCTCCACCTGAGGGGCAAAATCGGC
GTAATGTTGAGTGGAAGCCCAAATCATAAAAATCAAATGCTGCGGATCAATCGGCGCGAG
TTTGCCGCTTTTGACCCAACCGGCAATCAGCGCCGATTTCTCATCAATTAATGCCTTCAA
ATCGCCCGTCAGTTCATCCATTAACAGCGGCGCGCCTGCCAGCATCTCCATACAGAACAG
GCGCGAAGCCTGCGGATAATCGCGGGAGACTTCCAGCTTCAGACGGATGTACTCTTTGAT
CGCCGCCAGCGGGGCGAAATCTTCTCGAAACGCTTTTAACGGTGCCAGCCAGATATCGAG
AATCTGCCGCAGCACGGCAATATACAGCGCCTCTTTTGACGGAAAGTAATACAGCAGATT
GGTTTTTGAAACACCCGCCAACTCTGCGATCTGCTCCAGCCTTGTGCCGTGAAAACCGAA
TTGTGAAAAAGTGTCCAGTGCTGCGCTAAGAATCGCTTTTTTCTTCGCGCTTACTGCGCG
CGAACGTTTACCCTTTGTTTTCACTGCGCCTTGCGTCAT
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| AT6245 | Mycobacterium tuberculosis H37Rv |
41.509 |
13.054 |
0.104 |
| AT6245 | Mycobacterium tuberculosis H37Rv |
24.468 |
23.153 |
0.108 |