TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Antitoxin (Protein)
| Predicted family | vapB (AT6245) | Predicted domain | PF00440 (TetR_N) |
| Locus tag | orf2683 | Length | 231 a.a. |
| Coordinates | 2824202..2824897 (+) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf2676 | 2822725..2823684 | + | 960 | ORF2676 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2677 | 2823767..2824024 | - | 258 | ORF2677 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2678 | 2824202..2824897 | + | 696 | ORF2678 | Predicted ORF by PRODIGAL Version 1.20 | Antitoxin |
| orf2679 | 2824959..2825498 | - | 540 | ORF2679 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2680 | 2825708..2827012 | - | 1305 | ORF2680 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2681 | 2827420..2827962 | - | 543 | ORF2681 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2682 | 2827985..2829010 | - | 1026 | ORF2682 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2683 | 2829021..2829845 | - | 825 | ORF2683 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Antitoxin
No domain identified.
Sequences
Orphan Antitoxin
Download Length: Molecular weight: 25762.30 Da Isoelectric Point: 6.9174
>ORF2678 Orphan_TA_61 Antitoxin
VNGGDYFYNNLSFTVTRYNGIMATDSTQCVKKSRGRPKVFDRDAALDKAMKLFWQHGYEA
TSLADLVEATGAKAPTLYAEFTNKEGLFRAVLDRYIDRFAAKHEAQLFCEEKSVESALAD
YFAAIANCFTSKDTPAGCFMINNCTTLSPDSGDIANTLKSRHAMQERTLQQFLCQRQARG
EIPTHCDVTHLAEFLNCIIQGMSISAREGASLEKLMQIAGTTLRLWPELVK
VNGGDYFYNNLSFTVTRYNGIMATDSTQCVKKSRGRPKVFDRDAALDKAMKLFWQHGYEA
TSLADLVEATGAKAPTLYAEFTNKEGLFRAVLDRYIDRFAAKHEAQLFCEEKSVESALAD
YFAAIANCFTSKDTPAGCFMINNCTTLSPDSGDIANTLKSRHAMQERTLQQFLCQRQARG
EIPTHCDVTHLAEFLNCIIQGMSISAREGASLEKLMQIAGTTLRLWPELVK
Download Length: 696 bp
>ORF2678 Orphan_TA_61 Antitoxin
GTGAACGGAGGTGATTATTTTTATAATAACCTTTCATTCACAGTCACCAGGTACAACGGC
ATCATGGCAACTGACTCAACACAATGTGTAAAAAAAAGCCGTGGCCGCCCAAAAGTGTTC
GACAGGGATGCCGCGCTTGATAAGGCCATGAAATTGTTCTGGCAACACGGTTATGAAGCG
ACTTCTCTTGCGGACCTCGTCGAAGCGACCGGAGCCAAAGCGCCCACGCTATACGCGGAA
TTTACCAACAAAGAGGGGTTATTTCGTGCCGTTCTCGACCGCTATATCGATCGTTTTGCC
GCTAAGCATGAAGCACAGCTGTTTTGTGAAGAGAAAAGCGTGGAGTCTGCGCTGGCTGAC
TATTTTGCTGCCATCGCCAACTGCTTTACCAGCAAAGACACCCCGGCAGGCTGCTTCATG
ATCAACAACTGCACCACCCTCTCCCCAGATTCAGGAGATATCGCCAATACGTTGAAATCA
CGCCATGCGATGCAAGAGCGCACTTTGCAGCAGTTTTTATGTCAACGACAAGCGCGCGGG
GAAATCCCGACCCACTGTGACGTGACACATCTGGCAGAATTCCTTAATTGTATTATTCAG
GGGATGTCGATCAGCGCACGCGAAGGTGCATCGCTGGAAAAACTAATGCAGATTGCCGGA
ACGACTTTGCGTTTATGGCCCGAACTGGTGAAATAA
GTGAACGGAGGTGATTATTTTTATAATAACCTTTCATTCACAGTCACCAGGTACAACGGC
ATCATGGCAACTGACTCAACACAATGTGTAAAAAAAAGCCGTGGCCGCCCAAAAGTGTTC
GACAGGGATGCCGCGCTTGATAAGGCCATGAAATTGTTCTGGCAACACGGTTATGAAGCG
ACTTCTCTTGCGGACCTCGTCGAAGCGACCGGAGCCAAAGCGCCCACGCTATACGCGGAA
TTTACCAACAAAGAGGGGTTATTTCGTGCCGTTCTCGACCGCTATATCGATCGTTTTGCC
GCTAAGCATGAAGCACAGCTGTTTTGTGAAGAGAAAAGCGTGGAGTCTGCGCTGGCTGAC
TATTTTGCTGCCATCGCCAACTGCTTTACCAGCAAAGACACCCCGGCAGGCTGCTTCATG
ATCAACAACTGCACCACCCTCTCCCCAGATTCAGGAGATATCGCCAATACGTTGAAATCA
CGCCATGCGATGCAAGAGCGCACTTTGCAGCAGTTTTTATGTCAACGACAAGCGCGCGGG
GAAATCCCGACCCACTGTGACGTGACACATCTGGCAGAATTCCTTAATTGTATTATTCAG
GGGATGTCGATCAGCGCACGCGAAGGTGCATCGCTGGAAAAACTAATGCAGATTGCCGGA
ACGACTTTGCGTTTATGGCCCGAACTGGTGAAATAA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| AT6245 | Mycobacterium tuberculosis H37Rv |
41.071 |
13.793 |
0.1 |
| AT6245 | Mycobacterium tuberculosis H37Rv |
29.545 |
10.837 |
0.056 |