TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Antitoxin (Protein)
| Predicted family | vapB (AT6245) | Predicted domain | PF00440 (TetR_N) |
| Locus tag | orf466 | Length | 220 a.a. |
| Coordinates | 481040..481702 (+) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf458 | 476221..476511 | + | 291 | ORF458 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf459 | 476368..479472 | - | 3105 | ORF459 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf460 | 479484..480641 | - | 1158 | ORF460 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf461 | 481040..481702 | + | 663 | ORF461 | Predicted ORF by PRODIGAL Version 1.20 | Antitoxin |
| orf462 | 481705..481884 | - | 180 | ORF462 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf463 | 481968..482852 | - | 885 | ORF463 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf464 | 482938..483234 | - | 297 | ORF464 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf465 | 483260..484120 | - | 861 | ORF465 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf466 | 484554..485435 | - | 882 | ORF466 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Antitoxin
No domain identified.
Sequences
Orphan Antitoxin
Download Length: Molecular weight: 25197.18 Da Isoelectric Point: 6.2293
>ORF461 Orphan_TA_6 Antitoxin
MAKRTKAEALKTRQELIETAIAQFAQHGVSKTTLNDIADAANVTRGAIYWHFENKTQLFN
EMWLQQPSLRELIQEHLTAGLEHDPFQQLREKLIVGLQYIAKIPRQQALLKILYHKCEFN
DEMLAEGVIREKMGFNPQTLREVLQACQQQGCVANNLDLDVVMIIINGAFSGIVQNWLMN
MAGYDLYKQAPALVDNVLRMFMPDENITKLIHQTNELSVM
MAKRTKAEALKTRQELIETAIAQFAQHGVSKTTLNDIADAANVTRGAIYWHFENKTQLFN
EMWLQQPSLRELIQEHLTAGLEHDPFQQLREKLIVGLQYIAKIPRQQALLKILYHKCEFN
DEMLAEGVIREKMGFNPQTLREVLQACQQQGCVANNLDLDVVMIIINGAFSGIVQNWLMN
MAGYDLYKQAPALVDNVLRMFMPDENITKLIHQTNELSVM
Download Length: 663 bp
>ORF461 Orphan_TA_6 Antitoxin
ATGGCAAAAAGAACCAAAGCCGAAGCTCTGAAGACCCGGCAAGAACTGATTGAAACTGCC
ATCGCCCAGTTTGCGCAGCATGGCGTAAGCAAGACGACACTCAACGACATTGCCGACGCT
GCTAACGTTACGCGTGGCGCTATCTACTGGCACTTCGAAAACAAGACTCAACTGTTTAAT
GAGATGTGGTTGCAACAGCCTTCATTGCGGGAGTTAATCCAGGAACACTTGACGGCTGGA
TTAGAGCATGACCCGTTTCAACAATTGCGTGAAAAATTGATTGTCGGCTTGCAATATATT
GCCAAAATTCCCCGCCAGCAGGCGTTGCTGAAAATCTTATATCACAAATGTGAATTTAAT
GATGAGATGCTGGCCGAGGGAGTGATACGCGAAAAGATGGGCTTCAATCCGCAGACTCTC
CGCGAAGTATTGCAGGCGTGTCAGCAACAAGGTTGTGTAGCAAATAACCTCGATTTAGAT
GTTGTGATGATTATTATTAATGGTGCCTTCAGCGGAATTGTTCAAAACTGGTTAATGAAT
ATGGCGGGTTATGATCTTTATAAACAAGCCCCCGCTCTGGTCGATAACGTATTAAGAATG
TTCATGCCAGATGAAAACATAACGAAATTAATTCATCAAACGAATGAATTAAGTGTCATG
TAA
ATGGCAAAAAGAACCAAAGCCGAAGCTCTGAAGACCCGGCAAGAACTGATTGAAACTGCC
ATCGCCCAGTTTGCGCAGCATGGCGTAAGCAAGACGACACTCAACGACATTGCCGACGCT
GCTAACGTTACGCGTGGCGCTATCTACTGGCACTTCGAAAACAAGACTCAACTGTTTAAT
GAGATGTGGTTGCAACAGCCTTCATTGCGGGAGTTAATCCAGGAACACTTGACGGCTGGA
TTAGAGCATGACCCGTTTCAACAATTGCGTGAAAAATTGATTGTCGGCTTGCAATATATT
GCCAAAATTCCCCGCCAGCAGGCGTTGCTGAAAATCTTATATCACAAATGTGAATTTAAT
GATGAGATGCTGGCCGAGGGAGTGATACGCGAAAAGATGGGCTTCAATCCGCAGACTCTC
CGCGAAGTATTGCAGGCGTGTCAGCAACAAGGTTGTGTAGCAAATAACCTCGATTTAGAT
GTTGTGATGATTATTATTAATGGTGCCTTCAGCGGAATTGTTCAAAACTGGTTAATGAAT
ATGGCGGGTTATGATCTTTATAAACAAGCCCCCGCTCTGGTCGATAACGTATTAAGAATG
TTCATGCCAGATGAAAACATAACGAAATTAATTCATCAAACGAATGAATTAAGTGTCATG
TAA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| AT6245 | Mycobacterium tuberculosis H37Rv |
36.735 |
12.069 |
0.082 |