TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Antitoxin (Protein)
| Predicted family | vapB (AT6245) | Predicted domain | COG3311 (AlpA) |
| Locus tag | orf2457 | Length | 84 a.a. |
| Coordinates | 2590496..2590750 (-) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf2445 | 2585921..2587048 | - | 1128 | ORF2445 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2446 | 2587232..2587654 | - | 423 | ORF2446 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2447 | 2587670..2588431 | - | 762 | ORF2447 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2448 | 2588454..2589200 | - | 747 | ORF2448 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2449 | 2589207..2590064 | - | 858 | ORF2449 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2450 | 2590077..2590499 | - | 423 | ORF2450 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2451 | 2590496..2590750 | - | 255 | ORF2451 | Predicted ORF by PRODIGAL Version 1.20 | Antitoxin |
| orf2452 | 2590830..2591249 | + | 420 | ORF2452 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2453 | 2591680..2591832 | + | 153 | ORF2453 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2454 | 2592253..2592474 | + | 222 | ORF2454 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2455 | 2592474..2592644 | + | 171 | ORF2455 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2456 | 2592719..2592994 | + | 276 | ORF2456 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2457 | 2593096..2595696 | + | 2601 | ORF2457 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Antitoxin
No domain identified.
Sequences
Orphan Antitoxin
Download Length: Molecular weight: 9250.59 Da Isoelectric Point: 9.5506
>ORF2451 Orphan_TA_56 Antitoxin
MNQKTLEDVIKTVRVSVVADVCGVSQRAIYKWMDNGKLPRTEYTGETNYAEKIAHASNGL
FSADAILTIGRNKTTTKKLMGVDS
MNQKTLEDVIKTVRVSVVADVCGVSQRAIYKWMDNGKLPRTEYTGETNYAEKIAHASNGL
FSADAILTIGRNKTTTKKLMGVDS
Download Length: 255 bp
>ORF2451 Orphan_TA_56 Antitoxin
TCATGAATCAACTCCCATCAGCTTTTTCGTAGTAGTTTTATTTCTGCCAATAGTTAAAAT
TGCATCGGCAGAAAATAATCCGTTTGATGCATGAGCGATTTTTTCAGCGTAATTTGTTTC
GCCGGTATATTCTGTGCGAGGCAATTTTCCGTTATCCATCCATTTGTAGATTGCTCTTTG
GCTGACACCACAAACGTCGGCCACAACAGAAACGCGAACAGTTTTGATTACATCTTCAAG
TGTTTTCTGGTTCAT
TCATGAATCAACTCCCATCAGCTTTTTCGTAGTAGTTTTATTTCTGCCAATAGTTAAAAT
TGCATCGGCAGAAAATAATCCGTTTGATGCATGAGCGATTTTTTCAGCGTAATTTGTTTC
GCCGGTATATTCTGTGCGAGGCAATTTTCCGTTATCCATCCATTTGTAGATTGCTCTTTG
GCTGACACCACAAACGTCGGCCACAACAGAAACGCGAACAGTTTTGATTACATCTTCAAG
TGTTTTCTGGTTCAT
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| AT6245 | Mycobacterium tuberculosis H37Rv |
30.435 |
11.33 |
0.167 |