TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Toxin (Protein)
| Predicted family | hicA (T3593) | Predicted domain | - |
| Locus tag | orf2223 | Length | 190 a.a. |
| Coordinates | 2336009..2336581 (+) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf2216 | 2331251..2331685 | + | 435 | ORF2216 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2217 | 2331678..2334239 | + | 2562 | ORF2217 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2218 | 2334236..2334565 | + | 330 | ORF2218 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2219 | 2334565..2335263 | + | 699 | ORF2219 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2220 | 2335269..2336012 | + | 744 | ORF2220 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2221 | 2336009..2336581 | + | 573 | ORF2221 | Predicted ORF by PRODIGAL Version 1.20 | Toxin |
| orf2222 | 2336642..2340055 | + | 3414 | ORF2222 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2223 | 2340126..2340725 | + | 600 | ORF2223 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Toxin
No domain identified.
Sequences
Orphan Toxin
Download Length: Molecular weight: 19428.21 Da Isoelectric Point: 9.9872
>ORF2221 Orphan_TA_47 Toxin
VKTGAEAIRALATQLPAFRQKLSDGWYQVRIAGRDVSTSGLTAQLHETLPDGAVIHIVPR
VAGAKSGGVFQIVLGAAAIAGSFFTAGATLAAWGAAIGAGGMTGILFSLGASMVLGGVAQ
MLAPKARTPRTQTTDNGKQNTYFSSLDNMVAQGNVLPVLYGEMRVGSRVVSQEISTADEG
DGGQVVVIGR
VKTGAEAIRALATQLPAFRQKLSDGWYQVRIAGRDVSTSGLTAQLHETLPDGAVIHIVPR
VAGAKSGGVFQIVLGAAAIAGSFFTAGATLAAWGAAIGAGGMTGILFSLGASMVLGGVAQ
MLAPKARTPRTQTTDNGKQNTYFSSLDNMVAQGNVLPVLYGEMRVGSRVVSQEISTADEG
DGGQVVVIGR
Download Length: 573 bp
>ORF2221 Orphan_TA_47 Toxin
GTGAAAACGGGGGCTGAAGCCATCCGGGCACTGGCCACACAGCTCCCGGCGTTTCGTCAG
AAACTGAGCGACGGCTGGTATCAGGTACGGATTGCCGGGCGGGACGTCAGCACGTCCGGG
TTAACGGCGCAGTTACATGAGACTCTGCCTGATGGCGCTGTGATTCATATTGTTCCCAGA
GTCGCCGGGGCCAAGTCAGGTGGCGTATTCCAGATTGTCCTGGGGGCTGCCGCCATTGCC
GGATCATTCTTTACCGCCGGAGCCACCCTTGCAGCATGGGGGGCAGCCATTGGGGCCGGT
GGTATGACCGGCATCCTGTTTTCTCTCGGTGCCAGTATGGTGCTCGGTGGTGTGGCGCAG
ATGCTGGCACCGAAAGCCAGAACTCCCCGTACACAGACAACGGATAACGGTAAGCAGAAC
ACCTATTTCTCCTCACTGGATAACATGGTTGCCCAGGGCAATGTTCTGCCTGTTCTGTAC
GGGGAAATGCGCGTGGGGTCACGCGTGGTTTCTCAGGAGATCAGCACGGCAGACGAAGGG
GACGGTGGTCAGGTTGTGGTGATTGGTCGCTGA
GTGAAAACGGGGGCTGAAGCCATCCGGGCACTGGCCACACAGCTCCCGGCGTTTCGTCAG
AAACTGAGCGACGGCTGGTATCAGGTACGGATTGCCGGGCGGGACGTCAGCACGTCCGGG
TTAACGGCGCAGTTACATGAGACTCTGCCTGATGGCGCTGTGATTCATATTGTTCCCAGA
GTCGCCGGGGCCAAGTCAGGTGGCGTATTCCAGATTGTCCTGGGGGCTGCCGCCATTGCC
GGATCATTCTTTACCGCCGGAGCCACCCTTGCAGCATGGGGGGCAGCCATTGGGGCCGGT
GGTATGACCGGCATCCTGTTTTCTCTCGGTGCCAGTATGGTGCTCGGTGGTGTGGCGCAG
ATGCTGGCACCGAAAGCCAGAACTCCCCGTACACAGACAACGGATAACGGTAAGCAGAAC
ACCTATTTCTCCTCACTGGATAACATGGTTGCCCAGGGCAATGTTCTGCCTGTTCTGTAC
GGGGAAATGCGCGTGGGGTCACGCGTGGTTTCTCAGGAGATCAGCACGGCAGACGAAGGG
GACGGTGGTCAGGTTGTGGTGATTGGTCGCTGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| T3593 | Acinetobacter baumannii ATCC 17978 |
34.884 |
82.692 |
0.079 |