TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Antitoxin (Protein)
| Predicted family | phd (AT10030) | Predicted domain | PF13420 (Acetyltransf_4) |
| Locus tag | orf2168 | Length | 186 a.a. |
| Coordinates | 2294662..2295222 (-) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf2159 | 2290911..2293337 | - | 2427 | ORF2159 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2160 | 2293536..2293841 | - | 306 | ORF2160 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2161 | 2293913..2294659 | + | 747 | ORF2161 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2162 | 2294662..2295222 | - | 561 | ORF2162 | Predicted ORF by PRODIGAL Version 1.20 | Antitoxin |
| orf2163 | 2295257..2295598 | - | 342 | ORF2163 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2164 | 2295733..2296059 | + | 327 | ORF2164 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2165 | 2296265..2297479 | + | 1215 | ORF2165 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2166 | 2297491..2298510 | + | 1020 | ORF2166 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2167 | 2298568..2298678 | + | 111 | ORF2167 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2168 | 2298698..2299978 | - | 1281 | ORF2168 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Antitoxin
PF13420 (Acetyltransf_4) (E-value: 4.2e-13, Score:46.9)
PF00583 (GNAT) (E-value: 2.1e-07, Score:27.4)
PF00583 (GNAT) (E-value: 1.1e-05, Score:22.9)
PRK10151 (E-value: 1.3e-05, Score:22.7)
PRK10809 (E-value: 0.00055, Score:17.6)
PF08445 (FR47) (E-value: 0.00093, Score:16.3)
PRK10562 (E-value: 0.0048, Score:15)
PRK10514 (E-value: 0.014, Score:13.1)
COG5628 (E-value: 0.021, Score:13)
Sequences
Orphan Antitoxin
Download Length: Molecular weight: 21887.01 Da Isoelectric Point: 6.6594
>ORF2162 Orphan_TA_43 Antitoxin
MPSAHSVKLRPLEREDLRYVHQLDNNASVMRYWFEEPYEAFVELSDLYDKHIHDQSERRF
VVECDGEKAGLVELVEINHVHRRAEFQIIISPEYQGKGLATRAAKLAMDYGFTVLNLYKL
YLIVDKENEKAIHIYRKLGFSVEGELMHEFFINGQYRNAIRMCIFQHQYLAEHKTPGQTL
LKPTAQ
MPSAHSVKLRPLEREDLRYVHQLDNNASVMRYWFEEPYEAFVELSDLYDKHIHDQSERRF
VVECDGEKAGLVELVEINHVHRRAEFQIIISPEYQGKGLATRAAKLAMDYGFTVLNLYKL
YLIVDKENEKAIHIYRKLGFSVEGELMHEFFINGQYRNAIRMCIFQHQYLAEHKTPGQTL
LKPTAQ
Download Length: 561 bp
>ORF2162 Orphan_TA_43 Antitoxin
CTATTGTGCGGTCGGCTTCAGGAGAGTCTGACCCGGTGTTTTGTGCTCTGCCAGATACTG
ATGCTGGAATATACACATGCGAATGGCATTACGATATTGACCATTAATAAAGAACTCGTG
CATCAATTCACCTTCAACCGAAAAGCCAAGCTTGCGGTAAATGTGAATCGCTTTTTCATT
CTCTTTATCAACGATCAGATACAGCTTATAGAGATTGAGAACGGTAAAGCCATAGTCCAT
TGCTAATTTGGCGGCACGGGTTGCCAGACCTTTCCCCTGATACTCCGGGGAGATAATTAT
CTGAAATTCTGCCCGGCGATGTACATGGTTAATTTCCACCAGCTCCACCAGACCGGCTTT
TTCGCCGTCACATTCCACCACAAAGCGCCGTTCGCTCTGATCGTGAATATGCTTATCATA
CAGATCAGAGAGTTCAACAAAGGCTTCGTAGGGTTCCTCAAACCAGTAACGCATCACACT
GGCGTTATTGTCGAGTTGATGTACATAGCGTAAATCTTCACGCTCCAGCGGGCGTAGCTT
AACACTGTGGGCGCTTGGCAT
CTATTGTGCGGTCGGCTTCAGGAGAGTCTGACCCGGTGTTTTGTGCTCTGCCAGATACTG
ATGCTGGAATATACACATGCGAATGGCATTACGATATTGACCATTAATAAAGAACTCGTG
CATCAATTCACCTTCAACCGAAAAGCCAAGCTTGCGGTAAATGTGAATCGCTTTTTCATT
CTCTTTATCAACGATCAGATACAGCTTATAGAGATTGAGAACGGTAAAGCCATAGTCCAT
TGCTAATTTGGCGGCACGGGTTGCCAGACCTTTCCCCTGATACTCCGGGGAGATAATTAT
CTGAAATTCTGCCCGGCGATGTACATGGTTAATTTCCACCAGCTCCACCAGACCGGCTTT
TTCGCCGTCACATTCCACCACAAAGCGCCGTTCGCTCTGATCGTGAATATGCTTATCATA
CAGATCAGAGAGTTCAACAAAGGCTTCGTAGGGTTCCTCAAACCAGTAACGCATCACACT
GGCGTTATTGTCGAGTTGATGTACATAGCGTAAATCTTCACGCTCCAGCGGGCGTAGCTT
AACACTGTGGGCGCTTGGCAT
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| AT10030 | Vibrio cholerae O1 biovar El Tor str. N16961 |
30.769 |
39.565 |
0.151 |