TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Antitoxin (Protein)
| Predicted family | relB (AT6256) | Predicted domain | - |
| Locus tag | orf2158 | Length | 204 a.a. |
| Coordinates | 2286286..2286900 (-) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf2151 | 2281814..2282707 | + | 894 | ORF2151 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2152 | 2282842..2284062 | + | 1221 | ORF2152 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2153 | 2284187..2284882 | + | 696 | ORF2153 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2154 | 2284835..2286091 | - | 1257 | ORF2154 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2155 | 2286286..2286900 | - | 615 | ORF2155 | Predicted ORF by PRODIGAL Version 1.20 | Antitoxin |
| orf2156 | 2286943..2287797 | - | 855 | ORF2156 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2157 | 2287799..2288416 | - | 618 | ORF2157 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2158 | 2288427..2290823 | - | 2397 | ORF2158 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Antitoxin
No domain identified.
Sequences
Orphan Antitoxin
Download Length: Molecular weight: 23344.64 Da Isoelectric Point: 4.6364
>ORF2155 Orphan_TA_42 Antitoxin
MTHFSQQDNFSVAARVLGALFYYAPESAEAAPLVAVLTSDGWETQWPLPEASLAPLVTAF
QTQCEETHAQAWQRLFVGPWALPSPPWGSVWLDRESVLFGDSTLALRQWMREKGIQFEMK
QNEPEDHFGSLLLMAAWLAENGRQTECEELLAWHLFPWSTRFLDVFIEKAEHPFYRALGE
LARLTLAQWQSQLLIPVAVKPLFR
MTHFSQQDNFSVAARVLGALFYYAPESAEAAPLVAVLTSDGWETQWPLPEASLAPLVTAF
QTQCEETHAQAWQRLFVGPWALPSPPWGSVWLDRESVLFGDSTLALRQWMREKGIQFEMK
QNEPEDHFGSLLLMAAWLAENGRQTECEELLAWHLFPWSTRFLDVFIEKAEHPFYRALGE
LARLTLAQWQSQLLIPVAVKPLFR
Download Length: 615 bp
>ORF2155 Orphan_TA_42 Antitoxin
CTATCGAAACAGCGGTTTAACCGCGACAGGAATTAACAGTTGTGATTGCCATTGCGCCAG
CGTTAAGCGAGCCAGTTCACCCAGTGCACGGTAGAAAGGGTGTTCTGCTTTTTCGATAAA
AACATCAAGAAAACGTGTTGACCACGGAAAAAGGTGCCATGCCAGCAATTCTTCGCATTC
TGTCTGGCGACCATTTTCCGCCAACCACGCAGCCATCAACAGCAGTGAACCAAAATGATC
TTCCGGTTCGTTTTGCTTCATTTCAAACTGAATGCCTTTCTCGCGCATCCACTGACGAAG
TGCCAATGTTGAATCGCCAAACAGCACAGATTCGCGATCCAGCCAGACCGACCCCCACGG
CGGAGACGGCAGTGCCCACGGGCCGACAAACAAACGCTGCCAGGCCTGGGCGTGAGTCTC
TTCACACTGTGTCTGAAAAGCCGTCACCAGCGGCGCTAATGACGCTTCTGGTAGAGGCCA
CTGAGTTTCCCAGCCGTCACTGGTGAGTACCGCAACCAGAGGTGCGGCTTCCGCACTCTC
TGGAGCGTAATAAAACAGCGCGCCCAACACGCGCGCCGCGACAGAAAAATTATCTTGCTG
TGAAAAATGGGTCAT
CTATCGAAACAGCGGTTTAACCGCGACAGGAATTAACAGTTGTGATTGCCATTGCGCCAG
CGTTAAGCGAGCCAGTTCACCCAGTGCACGGTAGAAAGGGTGTTCTGCTTTTTCGATAAA
AACATCAAGAAAACGTGTTGACCACGGAAAAAGGTGCCATGCCAGCAATTCTTCGCATTC
TGTCTGGCGACCATTTTCCGCCAACCACGCAGCCATCAACAGCAGTGAACCAAAATGATC
TTCCGGTTCGTTTTGCTTCATTTCAAACTGAATGCCTTTCTCGCGCATCCACTGACGAAG
TGCCAATGTTGAATCGCCAAACAGCACAGATTCGCGATCCAGCCAGACCGACCCCCACGG
CGGAGACGGCAGTGCCCACGGGCCGACAAACAAACGCTGCCAGGCCTGGGCGTGAGTCTC
TTCACACTGTGTCTGAAAAGCCGTCACCAGCGGCGCTAATGACGCTTCTGGTAGAGGCCA
CTGAGTTTCCCAGCCGTCACTGGTGAGTACCGCAACCAGAGGTGCGGCTTCCGCACTCTC
TGGAGCGTAATAAAACAGCGCGCCCAACACGCGCGCCGCGACAGAAAAATTATCTTGCTG
TGAAAAATGGGTCAT
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| AT6256 | Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 |
35.135 |
40.217 |
0.064 |