TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Antitoxin (Protein)
| Predicted family | vapB (AT6245) | Predicted domain | PF00440 (TetR_N) |
| Locus tag | orf2130 | Length | 192 a.a. |
| Coordinates | 2254369..2254947 (+) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf2124 | 2250454..2252046 | - | 1593 | ORF2124 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2125 | 2252221..2253249 | + | 1029 | ORF2125 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2126 | 2253361..2254128 | + | 768 | ORF2126 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2127 | 2254369..2254947 | + | 579 | ORF2127 | Predicted ORF by PRODIGAL Version 1.20 | Antitoxin |
| orf2128 | 2255335..2257146 | + | 1812 | ORF2128 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2129 | 2257143..2258516 | + | 1374 | ORF2129 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2130 | 2258555..2259820 | + | 1266 | ORF2130 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Antitoxin
No domain identified.
Sequences
Orphan Antitoxin
Download Length: Molecular weight: 21323.56 Da Isoelectric Point: 6.2283
>ORF2127 Orphan_TA_41 Antitoxin
MQTEAQPTRTRILNAAREIFSENGFHSASMKAICKSCAISPGTLYHHFISKEALIQAIIL
QDQERALARFREPIEGIHFVDYMVESIVSLTHEAFGQRALVVEIMAEGMRNPQVAAMLKN
KHMTITEFVAQRMRDAQQKGEISPDINTSMTSRLLLDLTYGVLADIEAEDLAREASFAQG
LRAMIGGILTAS
MQTEAQPTRTRILNAAREIFSENGFHSASMKAICKSCAISPGTLYHHFISKEALIQAIIL
QDQERALARFREPIEGIHFVDYMVESIVSLTHEAFGQRALVVEIMAEGMRNPQVAAMLKN
KHMTITEFVAQRMRDAQQKGEISPDINTSMTSRLLLDLTYGVLADIEAEDLAREASFAQG
LRAMIGGILTAS
Download Length: 579 bp
>ORF2127 Orphan_TA_41 Antitoxin
ATGCAGACTGAAGCACAACCGACACGGACCCGGATCCTCAATGCTGCCAGAGAGATTTTT
TCAGAAAATGGATTTCACAGTGCCTCGATGAAAGCCATCTGTAAATCCTGCGCCATTAGT
CCCGGGACGCTCTATCACCATTTCATCTCCAAAGAAGCCTTGATTCAGGCGATTATCTTA
CAGGACCAGGAGAGGGCGCTGGCCCGTTTCCGGGAACCGATTGAAGGGATTCATTTTGTT
GACTATATGGTCGAGTCTATTGTCTCTCTCACCCATGAAGCCTTTGGGCAACGGGCGCTG
GTGGTTGAAATTATGGCGGAAGGGATGCGTAACCCACAGGTCGCCGCCATGCTTAAAAAT
AAGCATATGACGATCACTGAATTTGTTGCCCAGCGGATGCGTGATGCCCAGCAAAAAGGC
GAGATAAGCCCAGACATCAACACGTCAATGACTTCACGTTTACTGCTGGATCTGACCTAC
GGTGTACTGGCCGATATCGAAGCGGAAGACCTGGCGCGTGAAGCGTCGTTTGCTCAGGGA
TTACGCGCGATGATTGGCGGTATCTTAACCGCATCCTGA
ATGCAGACTGAAGCACAACCGACACGGACCCGGATCCTCAATGCTGCCAGAGAGATTTTT
TCAGAAAATGGATTTCACAGTGCCTCGATGAAAGCCATCTGTAAATCCTGCGCCATTAGT
CCCGGGACGCTCTATCACCATTTCATCTCCAAAGAAGCCTTGATTCAGGCGATTATCTTA
CAGGACCAGGAGAGGGCGCTGGCCCGTTTCCGGGAACCGATTGAAGGGATTCATTTTGTT
GACTATATGGTCGAGTCTATTGTCTCTCTCACCCATGAAGCCTTTGGGCAACGGGCGCTG
GTGGTTGAAATTATGGCGGAAGGGATGCGTAACCCACAGGTCGCCGCCATGCTTAAAAAT
AAGCATATGACGATCACTGAATTTGTTGCCCAGCGGATGCGTGATGCCCAGCAAAAAGGC
GAGATAAGCCCAGACATCAACACGTCAATGACTTCACGTTTACTGCTGGATCTGACCTAC
GGTGTACTGGCCGATATCGAAGCGGAAGACCTGGCGCGTGAAGCGTCGTTTGCTCAGGGA
TTACGCGCGATGATTGGCGGTATCTTAACCGCATCCTGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| AT6245 | Mycobacterium tuberculosis H37Rv |
34.568 |
19.951 |
0.146 |
| AT6245 | Mycobacterium tuberculosis H37Rv |
31.579 |
14.039 |
0.094 |