TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Antitoxin (Protein)
| Predicted family | NpoA (AT10134) | Predicted domain | - |
| Locus tag | orf2129 | Length | 255 a.a. |
| Coordinates | 2253361..2254128 (+) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf2123 | 2249272..2250444 | - | 1173 | ORF2123 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2124 | 2250454..2252046 | - | 1593 | ORF2124 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2125 | 2252221..2253249 | + | 1029 | ORF2125 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2126 | 2253361..2254128 | + | 768 | ORF2126 | Predicted ORF by PRODIGAL Version 1.20 | Antitoxin |
| orf2127 | 2254369..2254947 | + | 579 | ORF2127 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2128 | 2255335..2257146 | + | 1812 | ORF2128 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf2129 | 2257143..2258516 | + | 1374 | ORF2129 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Antitoxin
No domain identified.
Sequences
Orphan Antitoxin
Download Length: Molecular weight: 26689.48 Da Isoelectric Point: 4.8631
>ORF2126 Orphan_TA_40 Antitoxin
VFNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG
QAFACRCDITSEQELSALADFAVSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVF
SFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEK
NIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIIRLGQPQDIANAALFLCSPAASWVS
GQILTVSGGGVQELN
VFNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG
QAFACRCDITSEQELSALADFAVSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVF
SFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEK
NIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIIRLGQPQDIANAALFLCSPAASWVS
GQILTVSGGGVQELN
Download Length: 768 bp
>ORF2126 Orphan_TA_40 Antitoxin
GTGTTTAATTCTGACAACCTGAGACTCGACGGAAAATGCGCCATCATCACAGGTGCGGGT
GCAGGTATTGGTAAAGAAATCGCCATTACATTCGCGACAGCTGGCGCATCTGTGGTGGTC
AGTGATATTAACGCCGACGCAGCTAACCATGTTGTAGACGAAATTCAACAACTGGGTGGT
CAGGCATTTGCCTGCCGTTGTGATATTACTTCCGAACAGGAACTCTCTGCACTGGCAGAC
TTTGCCGTCAGTAAGCTGGGTAAAGTTGATATCCTGGTTAACAACGCCGGTGGCGGTGGT
CCTAAACCGTTTGATATGCCAATGGCAGATTTTCGCCGTGCTTATGAACTGAATGTGTTT
TCTTTTTTCCATCTGTCACAACTTGTTGCGCCAGAAATGGAAAAAAATGGCGGTGGCGTT
ATTCTGACCATCACTTCTATGGCGGCAGAAAATAAAAATATAAACATGACTTCCTATGCA
TCATCTAAAGCTGCGGCCAGTCATCTGGTCAGAAATATGGCATTTGACCTGGGTGAAAAA
AATATTCGGGTGAATGGCATTGCGCCGGGGGCAATATTAACCGATGCCCTGAAATCCGTT
ATTACACCAGAAATTGAACAAAAAATGTTACAGCACACGCCGATCATACGTCTGGGCCAA
CCGCAAGATATTGCTAACGCGGCGCTGTTCCTTTGCTCGCCTGCAGCCAGCTGGGTAAGC
GGACAAATTCTCACCGTCTCCGGTGGTGGGGTACAGGAGCTCAATTAA
GTGTTTAATTCTGACAACCTGAGACTCGACGGAAAATGCGCCATCATCACAGGTGCGGGT
GCAGGTATTGGTAAAGAAATCGCCATTACATTCGCGACAGCTGGCGCATCTGTGGTGGTC
AGTGATATTAACGCCGACGCAGCTAACCATGTTGTAGACGAAATTCAACAACTGGGTGGT
CAGGCATTTGCCTGCCGTTGTGATATTACTTCCGAACAGGAACTCTCTGCACTGGCAGAC
TTTGCCGTCAGTAAGCTGGGTAAAGTTGATATCCTGGTTAACAACGCCGGTGGCGGTGGT
CCTAAACCGTTTGATATGCCAATGGCAGATTTTCGCCGTGCTTATGAACTGAATGTGTTT
TCTTTTTTCCATCTGTCACAACTTGTTGCGCCAGAAATGGAAAAAAATGGCGGTGGCGTT
ATTCTGACCATCACTTCTATGGCGGCAGAAAATAAAAATATAAACATGACTTCCTATGCA
TCATCTAAAGCTGCGGCCAGTCATCTGGTCAGAAATATGGCATTTGACCTGGGTGAAAAA
AATATTCGGGTGAATGGCATTGCGCCGGGGGCAATATTAACCGATGCCCTGAAATCCGTT
ATTACACCAGAAATTGAACAAAAAATGTTACAGCACACGCCGATCATACGTCTGGGCCAA
CCGCAAGATATTGCTAACGCGGCGCTGTTCCTTTGCTCGCCTGCAGCCAGCTGGGTAAGC
GGACAAATTCTCACCGTCTCCGGTGGTGGGGTACAGGAGCTCAATTAA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| AT10134 | Acetobacter pasteurianus strain Ab3 |
31.837 |
86.268 |
0.306 |