TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Toxin (Protein)
| Predicted family | parE (T228) | Predicted domain | - |
| Locus tag | orf245 | Length | 280 a.a. |
| Coordinates | 265759..266601 (-) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf236 | 260885..261181 | + | 297 | ORF236 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf237 | 261309..261749 | - | 441 | ORF237 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf238 | 261762..263051 | - | 1290 | ORF238 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf239 | 263105..263458 | - | 354 | ORF239 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf240 | 263997..264170 | - | 174 | ORF240 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf241 | 264335..265687 | - | 1353 | ORF241 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf242 | 265759..266601 | - | 843 | ORF242 | Predicted ORF by PRODIGAL Version 1.20 | Toxin |
| orf243 | 266804..268846 | + | 2043 | ORF243 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf244 | 268854..269606 | + | 753 | ORF244 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf245 | 269655..271124 | - | 1470 | ORF245 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Toxin
No domain identified.
Sequences
Orphan Toxin
Download Length: Molecular weight: 31944.62 Da Isoelectric Point: 8.9498
>ORF242 Orphan_TA_4 Toxin
MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHAGAGRYQLGSEHAERTGE
YLEGIARIWQQDDLPAELEAYINVVKHFNRSGQLRYYPGSPLIARQLLREQDSLQLTELH
PSDYPLLRSEFQKDSRARVEKADGFQQLKAKLPPVSRRGLILIDPPYEMKTDYQAVVSGI
AEGYKRFATGTYALWYPVVLRQQIKRMIHDLEATGIRKILQIELAVLPDSDRRGMTASGM
IVINPPWKLEQQMNNVLPWLHSKLVPAGTGHATVSWIVPE
MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHAGAGRYQLGSEHAERTGE
YLEGIARIWQQDDLPAELEAYINVVKHFNRSGQLRYYPGSPLIARQLLREQDSLQLTELH
PSDYPLLRSEFQKDSRARVEKADGFQQLKAKLPPVSRRGLILIDPPYEMKTDYQAVVSGI
AEGYKRFATGTYALWYPVVLRQQIKRMIHDLEATGIRKILQIELAVLPDSDRRGMTASGM
IVINPPWKLEQQMNNVLPWLHSKLVPAGTGHATVSWIVPE
Download Length: 843 bp
>ORF242 Orphan_TA_4 Toxin
TTACTCCGGCACGATCCAGCTTACGGTGGCGTGCCCGGTGCCTGCCGGAACCAGTTTGCT
GTGCAGCCACGGCAGCACGTTATTCATCTGCTGTTCCAGTTTCCACGGCGGGTTAATCAC
AATCATGCCGGAAGCGGTCATGCCACGGCGATCGCTGTCTGGCAGTACCGCCAGTTCAAT
TTGCAGAATTTTGCGAATACCGGTCGCTTCCAGATCGTGGATCATGCGCTTAATTTGCTG
ACGCAGCACCACCGGATACCACAGTGCGTAAGTACCAGTGGCGAAACGTTTGTAACCTTC
TGCTATCCCGCTGACCACCGCCTGATAGTCGGTTTTCATTTCATACGGCGGGTCGATAAG
GATTAAACCACGGCGGGAAACCGGCGGCAGTTTGGCCTTAAGCTGCTGGAAACCATCGGC
TTTTTCGACGCGCGCACGGCTGTCTTTCTGAAATTCAGAACGCAGCAACGGGTAATCGCT
CGGGTGCAGTTCGGTCAGTTGCAGGCTGTCTTGTTCGCGCAGTAGCTGGCGAGCAATCAA
TGGCGAACCGGGGTAGTAACGCAACTGACCGCTACGGTTGAAGTGTTTTACCACATTGAT
GTACGCCTCCAGTTCTGCGGGCAAATCGTCCTGCTGCCAGATACGGGCGATGCCTTCGAG
ATATTCGCCGGTACGCTCGGCATGTTCGCTGCCTAACTGATAACGCCCGGCCCCTGCGTG
GGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCAGGCTCTG
AACGGTATGTTTAAGGACGTCGGCGTGGTTGCCAGCGTGAAAGCTGTGGCGATAACTGAG
CAT
TTACTCCGGCACGATCCAGCTTACGGTGGCGTGCCCGGTGCCTGCCGGAACCAGTTTGCT
GTGCAGCCACGGCAGCACGTTATTCATCTGCTGTTCCAGTTTCCACGGCGGGTTAATCAC
AATCATGCCGGAAGCGGTCATGCCACGGCGATCGCTGTCTGGCAGTACCGCCAGTTCAAT
TTGCAGAATTTTGCGAATACCGGTCGCTTCCAGATCGTGGATCATGCGCTTAATTTGCTG
ACGCAGCACCACCGGATACCACAGTGCGTAAGTACCAGTGGCGAAACGTTTGTAACCTTC
TGCTATCCCGCTGACCACCGCCTGATAGTCGGTTTTCATTTCATACGGCGGGTCGATAAG
GATTAAACCACGGCGGGAAACCGGCGGCAGTTTGGCCTTAAGCTGCTGGAAACCATCGGC
TTTTTCGACGCGCGCACGGCTGTCTTTCTGAAATTCAGAACGCAGCAACGGGTAATCGCT
CGGGTGCAGTTCGGTCAGTTGCAGGCTGTCTTGTTCGCGCAGTAGCTGGCGAGCAATCAA
TGGCGAACCGGGGTAGTAACGCAACTGACCGCTACGGTTGAAGTGTTTTACCACATTGAT
GTACGCCTCCAGTTCTGCGGGCAAATCGTCCTGCTGCCAGATACGGGCGATGCCTTCGAG
ATATTCGCCGGTACGCTCGGCATGTTCGCTGCCTAACTGATAACGCCCGGCCCCTGCGTG
GGTGTCGAGATAGAGAAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCAGGCTCTG
AACGGTATGTTTAAGGACGTCGGCGTGGTTGCCAGCGTGAAAGCTGTGGCGATAACTGAG
CAT
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| T228 | Caulobacter crescentus CB15 |
40.741 |
28.125 |
0.039 |