TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Toxin (Protein)
| Predicted family | mazF (T10090) | Predicted domain | - |
| Locus tag | orf1801 | Length | 62 a.a. |
| Coordinates | 1921385..1921573 (+) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf1789 | 1916842..1917759 | + | 918 | ORF1789 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1790 | 1917838..1918020 | + | 183 | ORF1790 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1791 | 1918191..1919885 | + | 1695 | ORF1791 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1792 | 1919882..1920697 | - | 816 | ORF1792 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1793 | 1920995..1921222 | - | 228 | ORF1793 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1794 | 1921385..1921573 | + | 189 | ORF1794 | Predicted ORF by PRODIGAL Version 1.20 | Toxin |
| orf1795 | 1921617..1922240 | - | 624 | ORF1795 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1796 | 1922530..1923315 | - | 786 | ORF1796 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1797 | 1923324..1923593 | - | 270 | ORF1797 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1798 | 1923603..1924340 | - | 738 | ORF1798 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1799 | 1924340..1924705 | - | 366 | ORF1799 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1800 | 1924708..1925121 | - | 414 | ORF1800 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1801 | 1925118..1926122 | - | 1005 | ORF1801 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Toxin
No domain identified.
Sequences
Orphan Toxin
Download Length: Molecular weight: 6945.84 Da Isoelectric Point: 4.3010
>ORF1794 Orphan_TA_36 Toxin
MKVNDRVTVKTDGGPRRPGVVLAVEEFSEGTMYLVSLEDYPLGIWFFNEAGHQDGIFVEK
AE
MKVNDRVTVKTDGGPRRPGVVLAVEEFSEGTMYLVSLEDYPLGIWFFNEAGHQDGIFVEK
AE
Download Length: 189 bp
>ORF1794 Orphan_TA_36 Toxin
ATGAAGGTGAATGATCGGGTAACAGTCAAAACGGATGGCGGTCCGCGTCGTCCTGGCGTG
GTACTGGCAGTTGAGGAGTTTAGTGAAGGCACAATGTACCTGGTTTCGCTGGAAGACTAC
CCGCTCGGCATCTGGTTCTTTAATGAAGCAGGGCATCAGGACGGTATCTTTGTGGAGAAA
GCAGAGTAA
ATGAAGGTGAATGATCGGGTAACAGTCAAAACGGATGGCGGTCCGCGTCGTCCTGGCGTG
GTACTGGCAGTTGAGGAGTTTAGTGAAGGCACAATGTACCTGGTTTCGCTGGAAGACTAC
CCGCTCGGCATCTGGTTCTTTAATGAAGCAGGGCATCAGGACGGTATCTTTGTGGAGAAA
GCAGAGTAA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| T10090 | Enterococcus faecalis ATCC 29212 |
50 |
17.699 |
0.161 |