TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Antitoxin (Protein)
| Predicted family | phd (AT10093) | Predicted domain | PF00392 (GntR) |
| Locus tag | orf1631 | Length | 248 a.a. |
| Coordinates | 1746346..1747092 (+) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf1621 | 1741829..1742167 | - | 339 | ORF1621 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1622 | 1742386..1743210 | - | 825 | ORF1622 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1623 | 1743331..1743603 | + | 273 | ORF1623 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1624 | 1743826..1744614 | + | 789 | ORF1624 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1625 | 1744611..1745411 | + | 801 | ORF1625 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1626 | 1745476..1746294 | + | 819 | ORF1626 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1627 | 1746346..1747092 | + | 747 | ORF1627 | Predicted ORF by PRODIGAL Version 1.20 | Antitoxin |
| orf1628 | 1747066..1748031 | - | 966 | ORF1628 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1629 | 1748028..1749032 | - | 1005 | ORF1629 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1630 | 1749029..1750306 | - | 1278 | ORF1630 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1631 | 1750563..1751615 | + | 1053 | ORF1631 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Antitoxin
No domain identified.
Sequences
Orphan Antitoxin
Download Length: Molecular weight: 28277.21 Da Isoelectric Point: 6.6083
>ORF1627 Orphan_TA_34 Antitoxin
MEQAHTQLIAQLNERILAADNTPLYIKFAETVKNAVRSGVLEHGNILPGERDLSQLTGVS
RITVRKAMQALEEEGVVTRSRGYGTQINNIFEYSLKEARGFSQQVVLRGKKPDTLWVNKR
VVKCPEEVAQQLAVEAGSDVFLLKRIRYVDEEAVSIEESWVPAHLIHDVDAIGISLYDYF
RSQHIYPQRTRSRVSARMPDAEFQSHIQLDSKIPVLVIKQVALDQQQRPIEYSISHCRSD
LYVFVCEE
MEQAHTQLIAQLNERILAADNTPLYIKFAETVKNAVRSGVLEHGNILPGERDLSQLTGVS
RITVRKAMQALEEEGVVTRSRGYGTQINNIFEYSLKEARGFSQQVVLRGKKPDTLWVNKR
VVKCPEEVAQQLAVEAGSDVFLLKRIRYVDEEAVSIEESWVPAHLIHDVDAIGISLYDYF
RSQHIYPQRTRSRVSARMPDAEFQSHIQLDSKIPVLVIKQVALDQQQRPIEYSISHCRSD
LYVFVCEE
Download Length: 747 bp
>ORF1627 Orphan_TA_34 Antitoxin
ATGGAACAAGCGCATACCCAGCTGATTGCCCAACTGAACGAGCGTATTTTAGCGGCGGAT
AACACGCCGCTTTATATTAAGTTTGCCGAAACGGTAAAAAATGCCGTGCGCAGCGGGGTG
CTGGAGCATGGCAATATTTTGCCCGGTGAGCGTGATTTAAGTCAGTTAACCGGCGTTTCG
CGCATTACGGTGCGCAAGGCGATGCAGGCGCTGGAAGAAGAGGGTGTGGTGACGCGTTCG
CGCGGTTACGGCACGCAGATCAACAACATCTTCGAATACTCGTTGAAAGAAGCGCGAGGT
TTTTCTCAGCAGGTGGTATTGCGCGGGAAAAAGCCCGATACGCTATGGGTTAACAAGCGT
GTCGTGAAATGTCCCGAAGAAGTCGCGCAGCAGCTGGCGGTCGAAGCAGGAAGTGATGTC
TTTTTGCTTAAGCGTATTCGCTATGTCGATGAAGAAGCGGTATCGATTGAGGAATCGTGG
GTTCCGGCGCATTTAATTCATGATGTTGATGCCATCGGGATTTCACTTTATGACTATTTC
CGCAGCCAGCACATTTACCCACAACGTACGCGTTCCCGCGTTAGCGCCCGGATGCCGGAT
GCCGAGTTTCAGTCACATATTCAGTTAGATAGCAAAATACCGGTGCTGGTGATCAAGCAA
GTGGCGCTTGACCAACAGCAACGGCCTATTGAGTACAGCATTAGCCACTGTCGCAGCGAT
CTATACGTTTTTGTGTGCGAGGAGTAG
ATGGAACAAGCGCATACCCAGCTGATTGCCCAACTGAACGAGCGTATTTTAGCGGCGGAT
AACACGCCGCTTTATATTAAGTTTGCCGAAACGGTAAAAAATGCCGTGCGCAGCGGGGTG
CTGGAGCATGGCAATATTTTGCCCGGTGAGCGTGATTTAAGTCAGTTAACCGGCGTTTCG
CGCATTACGGTGCGCAAGGCGATGCAGGCGCTGGAAGAAGAGGGTGTGGTGACGCGTTCG
CGCGGTTACGGCACGCAGATCAACAACATCTTCGAATACTCGTTGAAAGAAGCGCGAGGT
TTTTCTCAGCAGGTGGTATTGCGCGGGAAAAAGCCCGATACGCTATGGGTTAACAAGCGT
GTCGTGAAATGTCCCGAAGAAGTCGCGCAGCAGCTGGCGGTCGAAGCAGGAAGTGATGTC
TTTTTGCTTAAGCGTATTCGCTATGTCGATGAAGAAGCGGTATCGATTGAGGAATCGTGG
GTTCCGGCGCATTTAATTCATGATGTTGATGCCATCGGGATTTCACTTTATGACTATTTC
CGCAGCCAGCACATTTACCCACAACGTACGCGTTCCCGCGTTAGCGCCCGGATGCCGGAT
GCCGAGTTTCAGTCACATATTCAGTTAGATAGCAAAATACCGGTGCTGGTGATCAAGCAA
GTGGCGCTTGACCAACAGCAACGGCCTATTGAGTACAGCATTAGCCACTGTCGCAGCGAT
CTATACGTTTTTGTGTGCGAGGAGTAG
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| AT10093 | Burkholderia pseudomallei K96243 |
30.435 |
32.394 |
0.113 |