TAfinder detailed results

Overview

Job ID wrVbGpMxFf
Sequence name NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome
Predicted type II

Orphan Antitoxin (Protein)


Predicted family TsdA (AT10117) Predicted domain -
Locus tag orf1628 Length 90 a.a.
Coordinates 1743331..1743603 (+)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
orf1620 1740713..1741747 + 1035 ORF1620 Predicted ORF by PRODIGAL Version 1.20 -
orf1621 1741829..1742167 - 339 ORF1621 Predicted ORF by PRODIGAL Version 1.20 -
orf1622 1742386..1743210 - 825 ORF1622 Predicted ORF by PRODIGAL Version 1.20 -
orf1623 1743331..1743603 + 273 ORF1623 Predicted ORF by PRODIGAL Version 1.20 Antitoxin
orf1624 1743826..1744614 + 789 ORF1624 Predicted ORF by PRODIGAL Version 1.20 -
orf1625 1744611..1745411 + 801 ORF1625 Predicted ORF by PRODIGAL Version 1.20 -
orf1626 1745476..1746294 + 819 ORF1626 Predicted ORF by PRODIGAL Version 1.20 -
orf1627 1746346..1747092 + 747 ORF1627 Predicted ORF by PRODIGAL Version 1.20 -
orf1628 1747066..1748031 - 966 ORF1628 Predicted ORF by PRODIGAL Version 1.20 -

Domains

The domains were predicted by HMMER and were sorted by score.

Orphan Antitoxin


No domain identified.



Sequences

Orphan Antitoxin        


Download         Length:         Molecular weight: 10133.87 Da        Isoelectric Point: 9.0529

>ORF1623 Orphan_TA_33 Antitoxin
MSHTIRDKQKLKARASKIQGQVVALKKMLDEPHECAAVLQQIAAIRGAVNGLMREVIKGH
LTEHIVHQGDELKREEDLDVVLKVLDSYIK

Download         Length: 273 bp

>ORF1623 Orphan_TA_33 Antitoxin
ATGTCTCATACAATCCGTGATAAACAGAAACTGAAAGCGCGTGCCAGTAAGATTCAGGGC
CAGGTCGTGGCGCTCAAGAAAATGCTCGACGAGCCGCACGAATGCGCTGCAGTTTTACAA
CAGATTGCTGCTATCCGTGGCGCGGTAAACGGTCTGATGCGGGAAGTGATTAAAGGTCAT
CTGACGGAACACATCGTTCACCAGGGGGATGAGCTAAAACGTGAAGAAGATCTGGATGTC
GTTCTGAAGGTGCTGGATTCATATATCAAATAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
AT10117 Staphylococcus aureus subsp. aureus N315

31.818

90.722

0.311