TAfinder detailed results
Overview
| Job ID | wrVbGpMxFf | ||
| Sequence name | NZ_CP026085.1 Escherichia coli strain DH5alpha chromosome, complete genome | ||
| Predicted type | II | ||
Orphan Antitoxin (Protein)
| Predicted family | panA (AT10014) | Predicted domain | - |
| Locus tag | orf1627 | Length | 112 a.a. |
| Coordinates | 1741829..1742167 (-) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| orf1617 | 1736904..1737446 | + | 543 | ORF1617 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1618 | 1737527..1738201 | + | 675 | ORF1618 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1619 | 1738217..1740697 | + | 2481 | ORF1619 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1620 | 1740713..1741747 | + | 1035 | ORF1620 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1621 | 1741829..1742167 | - | 339 | ORF1621 | Predicted ORF by PRODIGAL Version 1.20 | Antitoxin |
| orf1622 | 1742386..1743210 | - | 825 | ORF1622 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1623 | 1743331..1743603 | + | 273 | ORF1623 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1624 | 1743826..1744614 | + | 789 | ORF1624 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1625 | 1744611..1745411 | + | 801 | ORF1625 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1626 | 1745476..1746294 | + | 819 | ORF1626 | Predicted ORF by PRODIGAL Version 1.20 | - |
| orf1627 | 1746346..1747092 | + | 747 | ORF1627 | Predicted ORF by PRODIGAL Version 1.20 | - |
Domains
The domains were predicted by HMMER and were sorted by score.
Orphan Antitoxin
No domain identified.
Sequences
Orphan Antitoxin
Download Length: Molecular weight: 12466.20 Da Isoelectric Point: 7.3110
>ORF1621 Orphan_TA_32 Antitoxin
MTIKNKMLLGALLLVTSAAWAAPATAGSTNTSGISKYELSSFIADFKHFKPGDTVPEMYR
TDEYNIKQWQLRNLPAPDAGTHWTYMGGAYVLISDTDGKIIKAYDGEIFYHR
MTIKNKMLLGALLLVTSAAWAAPATAGSTNTSGISKYELSSFIADFKHFKPGDTVPEMYR
TDEYNIKQWQLRNLPAPDAGTHWTYMGGAYVLISDTDGKIIKAYDGEIFYHR
Download Length: 339 bp
>ORF1621 Orphan_TA_32 Antitoxin
TTAGCGATGATAAAAAATCTCACCGTCGTAGGCTTTAATGATTTTACCGTCGGTGTCGCT
GATCAACACGTACGCGCCACCCATATAGGTCCAGTGCGTCCCGGCATCAGGCGCGGGCAG
GTTACGTAACTGCCACTGCTTAATGTTGTACTCATCGGTGCGGTACATCTCTGGGACGGT
ATCGCCTGGTTTGAAATGCTTAAAGTCAGCAATGAAACTGCTTAACTCATACTTAGAAAT
TCCCGAGGTATTGGTCGAACCCGCGGTGGCTGGTGCGGCCCAGGCGGCACTGGTAACCAG
CAAAAGCGCACCCAGCAACATCTTATTTTTAATGGTCAT
TTAGCGATGATAAAAAATCTCACCGTCGTAGGCTTTAATGATTTTACCGTCGGTGTCGCT
GATCAACACGTACGCGCCACCCATATAGGTCCAGTGCGTCCCGGCATCAGGCGCGGGCAG
GTTACGTAACTGCCACTGCTTAATGTTGTACTCATCGGTGCGGTACATCTCTGGGACGGT
ATCGCCTGGTTTGAAATGCTTAAAGTCAGCAATGAAACTGCTTAACTCATACTTAGAAAT
TCCCGAGGTATTGGTCGAACCCGCGGTGGCTGGTGCGGCCCAGGCGGCACTGGTAACCAG
CAAAAGCGCACCCAGCAACATCTTATTTTTAATGGTCAT
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| AT10014 | Ligilactobacillus animalis strain 381-IL-28 NODE_6_length_144356_cov_27.537725 |
41.935 |
12.971 |
0.116 |